RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 SUOXP51687 545 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 RPL26P61254 145 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 CDK18Q07002 472 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 DUSP8Q13202 625 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 MPP3Q13368 585 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 MSLNQ13421 630 aaPredicted RBP8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 OLIG2Q13516 323 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 SEMA5AQ13591 1074 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 GPR19Q15760 415 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 CDKN3Q16667 212 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 PARP6Q2NL67 630 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 TMEM52BQ4KMG9 183 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 ARMC12Q5T9G4 340 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 FAXCQ5TGI0 409 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 SLC36A4Q6YBV0 504 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 DPPA4Q7L190 304 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 TRIM69Q86WT6 500 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 SLC41A1Q8IVJ1 513 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 KIAA2013Q8IYS2 634 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 SPATA4Q8NEY3 305 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 LPCAT1Q8NF37 534 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 OR2T34Q8NGX1 318 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 OR14C36Q8NHC7 312 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 ATL2Q8NHH9 583 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 GANCQ8TET4 914 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 LYSMD1Q96S90 227 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 FERMT1Q9BQL6 677 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 GPR174Q9BXC1 333 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 NELFAQ9H3P2 528 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 EBF2Q9HAK2 575 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 PREBQ9HCU5 417 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 DYRK4Q9NR20 520 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 PAK5Q9P286 719 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 B4GALT6Q9UBX8 382 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 PCYOX1Q9UHG3 505 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 RPL26L1Q9UNX3 145 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 NCKAP1Q9Y2A7 1128 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 CEP295Q9C0D2 2601 aa8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 TNRC6BQ9UPQ9 1833 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-217ENST00000530253 LRRC72A6NJI9 287 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 ANXA9O76027 345 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 URI1O94763 535 aaPredicted RBP8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 SUN1O94901 812 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 AP2A1O95782 977 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 NDST3O95803 873 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 ALPIP09923 528 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 CA4P22748 312 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 PAFAH1B1P43034 410 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 PTGER3P43115 390 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 MAGEA6P43360 314 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 CCR5P51681 352 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 GEMP55040 296 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 SEMG2Q02383 582 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 C2orf54Q08AI8 447 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 TUBA3CQ13748 450 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 FGL2Q14314 439 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 GALNT3Q14435 633 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 CNGA3Q16281 694 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 WHAMMP3Q1A5X7 153 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 ZNF284Q2VY69 593 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 SPDYCQ5MJ68 293 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 SEL1L3Q68CR1 1132 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 KIAA0895LQ68EN5 471 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 TUBA3EQ6PEY2 450 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 RANBP10Q6VN20 620 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 ZNF534Q76KX8 674 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 TSPAN33Q86UF1 283 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 HORMAD1Q86X24 394 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 KLHL7Q8IXQ5 586 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 CBARPQ8N350 705 aaPredicted RBP8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 CCDC89Q8N998 374 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 IPMKQ8NFU5 416 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 CADM4Q8NFZ8 388 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 WDR48Q8TAF3 677 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 PDCD6IPQ8WUM4 868 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 BIRC7Q96CA5 298 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 SCRN2Q96FV2 425 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 PPP1R2P1Q96PQ5 205 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 FICDQ9BVA6 458 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 PHTF1Q9UMS5 762 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 ATP23Q9Y6H3 246 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 SLCO1B1Q9Y6L6 691 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 CHD8Q9HCK8 2581 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 NUMA1Q14980 2115 aa8.72□□□□□ -1.01
CCDC90B-217ENST00000530253 SPAG17Q6Q759 2223 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 A0A087X1B8 175 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 A0A0U1RQS6 177 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 ANKRD66B4E2M5 251 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 TSPAN6O43657 245 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 USP12O75317 370 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 TMEM63AO94886 807 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 HEXIM1O94992 359 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 AGTP01019 485 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 KRT14P02533 472 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 C1SP09871 688 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms