RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PM20D2Q8IYS1 436 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 MAML2Q8IZL2 1156 aaPredicted RBP4.43□□□□□ -1.7
C11orf88-204ENST00000529661 FBXO39Q8N4B4 442 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 WDR20Q8TBZ3 569 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 C3orf30Q96M34 536 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 RAB3IPQ96QF0 476 aaPredicted RBP4.43□□□□□ -1.7
C11orf88-204ENST00000529661 PCYT2Q99447 389 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 ABHD6Q9BV23 337 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 SLC25A23Q9BV35 468 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 NUP85Q9BW27 656 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 RAB6CQ9H0N0 254 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 NOL11Q9H8H0 719 aaKnown RBP4.43□□□□□ -1.7
C11orf88-204ENST00000529661 PRMT7Q9NVM4 692 aaPredicted RBP4.43□□□□□ -1.7
C11orf88-204ENST00000529661 KCNG2Q9UJ96 466 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 SOS1Q07889 1333 aaPredicted RBP4.43□□□□□ -1.7
C11orf88-204ENST00000529661 A0A0B4J293 547 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 A0A1W2PPM1 405 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 FAM170AA1A519 330 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 CLDN14O95500 239 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 PMS2P2O95744 297 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 IGKV3-20P01619 116 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 DANCRP0C864 163 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 S1PR1P21453 382 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 HOXC8P31273 242 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 GP5P40197 560 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 MATR3P43243 847 aaKnown RBP eCLIP4.42□□□□□ -1.7
C11orf88-204ENST00000529661 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
C11orf88-204ENST00000529661 CDK3Q00526 305 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 PPARDQ03181 441 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 ZNF155Q12901 538 aaPredicted RBP4.42□□□□□ -1.7
C11orf88-204ENST00000529661 PTPRCAPQ14761 206 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 HYAL4Q2M3T9 481 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 FAM122CQ6P4D5 195 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 FIGLAQ6QHK4 219 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 SUSD1Q6UWL2 747 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 Q75L30 129 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 ERN2Q76MJ5 926 aaKnown RBP4.42□□□□□ -1.7
C11orf88-204ENST00000529661 ZNF595Q8IYB9 648 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 EXD1Q8NHP7 514 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 GOT1L1Q8NHS2 421 aaPredicted RBP4.42□□□□□ -1.7
C11orf88-204ENST00000529661 SPATA3Q8NHX4 192 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 KIF18AQ8NI77 898 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 ABTB1Q969K4 478 aaPredicted RBP4.42□□□□□ -1.7
C11orf88-204ENST00000529661 SIPA1Q96FS4 1042 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 QRFPRQ96P65 431 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 OR6C1Q96RD1 312 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 OLFM1Q99784 485 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 C16orf70Q9BSU1 422 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 ZWILCHQ9H900 591 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 EQTNQ9NQ60 294 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 TMEM30AQ9NV96 361 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 PCDHAC2Q9Y5I4 1007 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 PTPRCP08575 1304 aa4.42□□□□□ -1.7
C11orf88-204ENST00000529661 OR2M5A3KFT3 312 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 LILRA5A6NI73 299 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 HNRNPCL2B2RXH8 293 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 MID1O15344 667 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 SSX4O60224 188 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 SLCO2B1O94956 709 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 CELF2O95319 508 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 ACHEP22303 614 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 MCCP23508 829 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 DNASE1P24855 282 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 CORO1AP31146 461 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 GABRA5P31644 462 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 LIMK1P53667 647 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 DLX5P56178 289 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 BFSP1Q12934 665 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 ZNF273Q14593 569 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 NR1D2Q14995 579 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 MAP7D3Q8IWC1 876 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 THNSL1Q8IYQ7 743 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 POC1AQ8NBT0 407 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 PAPD5Q8NDF8 572 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 SPATA22Q8NHS9 363 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 SECTM1Q8WVN6 248 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 SLC44A1Q8WWI5 657 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 MRPS27Q92552 414 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 TANKQ92844 425 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 SECISBP2LQ93073 1101 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 PIGTQ969N2 578 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 PRMT6Q96LA8 375 aaPredicted RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 LRRC3BQ96PB8 259 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 INPP4AQ96PE3 977 aaPredicted RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 ZNF385AQ96PM9 386 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 PKP4Q99569 1192 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 MOV10L1Q9BXT6 1211 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 CNOT10Q9H9A5 744 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 PFDN4Q9NQP4 134 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 DONSONQ9NYP3 566 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 ZNF224Q9NZL3 707 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 SIX4Q9UIU6 781 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 ANAPC5Q9UJX4 755 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 GTF3C4Q9UKN8 822 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 FLT1P17948 1338 aa4.41□□□□□ -1.7
C11orf88-204ENST00000529661 PDS5AQ29RF7 1337 aaKnown RBP4.41□□□□□ -1.7
C11orf88-204ENST00000529661 NOTCH4Q99466 2003 aa4.4□□□□□ -1.7
C11orf88-204ENST00000529661 A0A087WYN8 130 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 PRAC2D3DTV9 90 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 PLK4O00444 970 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms