RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 VPS35Q96QK1 796 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 LMF1Q96S06 567 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 TLR10Q9BXR5 811 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 ADGRE3Q9BY15 652 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 GANQ9H2C0 597 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 EPS8L2Q9H6S3 715 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 ZFYVE1Q9HBF4 777 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 PARVAQ9NVD7 372 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 DTLQ9NZJ0 730 aa11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 PTRH2Q9Y3E5 179 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-207ENST00000529553 TRGV8A0A0C4DH27 118 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 MATN3O15232 486 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 ZNF749O43361 778 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 CD99P14209 185 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 AMPD1P23109 780 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 MIPP30301 263 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 PBX1P40424 430 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 TDGF1P3P51864 188 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 KCNK10P57789 538 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 DCDP81605 110 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 TMEM115Q12893 351 aaPredicted RBP11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 MAMLD1Q13495 774 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 DPYSL2Q16555 572 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 BOLA3Q53S33 107 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 IRAK1BP1Q5VVH5 260 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 ACAD10Q6JQN1 1059 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 PPP1R2P3Q6NXS1 205 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 TMEM207Q6UWW9 146 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 TMC3Q7Z5M5 1100 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 PPP1R32Q7Z5V6 425 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 TTC30BQ8N4P2 665 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 BEND7Q8N7W2 519 aaPredicted RBP11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 MLKLQ8NB16 471 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 ANKRD20A12PQ8NF67 263 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 ARRDC2Q8TBH0 407 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 CHTF18Q8WVB6 975 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 NR4A3Q92570 626 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 MAML1Q92585 1016 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 AP1M1Q9BXS5 423 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 ETNK2Q9NVF9 386 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 AP1M2Q9Y6Q5 423 aa11.29□□□□□ -0.6
AMBRA1-207ENST00000529553 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 TMEM191CA6NGB0 347 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 PES1O00541 588 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 POP7O75817 140 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 NADKO95544 446 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 MTHFD1P11586 935 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 CDH3P22223 829 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 CA7P43166 264 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 ZNF165P49910 485 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 SMSP52788 366 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 POLR2FP61218 127 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 DSC2Q02487 901 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 PRKAA1Q13131 559 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 GTF2H3Q13889 308 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 PRKD1Q15139 912 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 INAQ16352 499 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 METRNLQ641Q3 311 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 PLEKHA7Q6IQ23 1121 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 TIGD7Q6NT04 549 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 RHBDD2Q6NTF9 364 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 DUS1LQ6P1R4 473 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 GFRALQ6UXV0 394 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 TRAPPC5Q8IUR0 188 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 GPR135Q8IZ08 494 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 PROKR1Q8TCW9 393 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 MTFMTQ96DP5 389 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 CNDP1Q96KN2 507 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 TTC25Q96NG3 672 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 CSPG4P5Q96PW8 444 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 AGPAT1Q99943 283 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 LHPPQ9H008 270 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 KIR3DX1Q9H7L2 352 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 MAGEE1Q9HCI5 957 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 RBM22Q9NW64 420 aaKnown RBP eCLIP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 NDOR1Q9UHB4 597 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 SLC24A2Q9UI40 661 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 POMT2Q9UKY4 750 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 PIKFYVEQ9Y2I7 2098 aa11.28□□□□□ -0.6
AMBRA1-207ENST00000529553 KLHL33A6NCF5 533 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 MTX2O75431 263 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 CBSLP0DN79 551 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 MMP11P24347 488 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 CBSP35520 551 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 PCK1P35558 622 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 TLE4Q04727 773 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 GALNT3Q14435 633 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 KHDC1Q4VXA5 237 aaKnown RBP11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 ALS2CLQ60I27 953 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 FBXO38Q6PIJ6 1188 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 ACBD4Q8NC06 268 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 DTX3LQ8TDB6 740 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 SRPK1Q96SB4 655 aaKnown RBP11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 PITPNM3Q9BZ71 974 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 IMP3Q9NV31 184 aaKnown RBP11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 ACSL5Q9ULC5 683 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 PSMD13Q9UNM6 376 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms