RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 C2orf73Q8N5S3 287 aaPredicted RBP17.66■□□□□ 0.42
LTBP3-210ENST00000528516 SMG8Q8ND04 991 aaKnown RBP17.66■□□□□ 0.42
LTBP3-210ENST00000528516 GPR156Q8NFN8 814 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 OR7G1Q8NGA0 311 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 ROPN1LQ96C74 230 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 C19orf60Q96EN9 201 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 CDK5RAP1Q96SZ6 601 aaKnown RBP17.66■□□□□ 0.42
LTBP3-210ENST00000528516 SMOQ99835 787 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 PCDHB3Q9Y5E6 796 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 ZSCAN5BA6NJL1 495 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 ENPP3O14638 875 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 ZNF37AP17032 561 aaPredicted RBP17.66■□□□□ 0.42
LTBP3-210ENST00000528516 MC4RP32245 332 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 FAM98BQ52LJ0 330 aaKnown RBP17.66■□□□□ 0.42
LTBP3-210ENST00000528516 NEK5Q6P3R8 708 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 P2RY8Q86VZ1 359 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 GTF3C2Q8WUA4 911 aaPredicted RBP17.66■□□□□ 0.42
LTBP3-210ENST00000528516 PTCD2Q8WV60 388 aaKnown RBP17.66■□□□□ 0.42
LTBP3-210ENST00000528516 TMEM74Q96NL1 305 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 ACAT2Q9BWD1 397 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 SMURF2Q9HAU4 748 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 PDLIM7Q9NR12 457 aa17.66■□□□□ 0.42
LTBP3-210ENST00000528516 CENPXA8MT69 81 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 ZNF99A8MXY4 864 aaPredicted RBP17.65■□□□□ 0.42
LTBP3-210ENST00000528516 SLC35E2BP0CK96 405 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 GTF2E2P29084 291 aaKnown RBP17.65■□□□□ 0.42
LTBP3-210ENST00000528516 GSK3BP49841 420 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 CLCN5P51795 746 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 NCS1P62166 190 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 RRM2BQ7LG56 351 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 ZC3HC1Q86WB0 502 aaKnown RBP17.65■□□□□ 0.42
LTBP3-210ENST00000528516 SELENOMQ8WWX9 145 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 BBS2Q9BXC9 721 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 LTB4R2Q9NPC1 389 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 A0A0G2JLL6 359 aaPredicted RBP17.65■□□□□ 0.42
LTBP3-210ENST00000528516 CNTN5O94779 1100 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 ASGR1P07306 291 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 SMAD3P84022 425 aaKnown RBP17.65■□□□□ 0.42
LTBP3-210ENST00000528516 PRRT2Q7Z6L0 340 aaPredicted RBP17.65■□□□□ 0.42
LTBP3-210ENST00000528516 IRF2BPLQ9H1B7 796 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 TOR3AQ9H497 397 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 MAGEE1Q9HCI5 957 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 LOC100506127A0A0U1RQW1 187 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 DYRK3O43781 588 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 XPNPEP2O43895 674 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 AGXTP21549 392 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 TGM1P22735 817 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 ARSFP54793 590 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 DEFA1P59665 94 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 DEFA3P59666 94 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 ZFP69Q49AA0 526 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 CLEC14AQ86T13 490 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 ELMOD1Q8N336 334 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 TMBIM1Q969X1 311 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 CRTAC1Q9NQ79 661 aa17.65■□□□□ 0.42
LTBP3-210ENST00000528516 A0A087X1B8 175 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 SMIM35A0A1B0GVV1 85 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 M0QX08 132 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 NPHS1O60500 1241 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 CPNE6O95741 557 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 PRKAR2AP13861 404 aaKnown RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 ITIH1P19827 911 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 GSTM2P28161 218 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 IFNA8P32881 189 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 TRAF3Q13114 568 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 SIM2Q14190 667 aaPredicted RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 E2F2Q14209 437 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 MAPKAPK3Q16644 382 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 FAM209AQ5JX71 171 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 TBPL2Q6SJ96 375 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 RASAL3Q86YV0 1011 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 TWIST2Q8WVJ9 160 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 OPTCQ9UBM4 332 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 BOLA1Q9Y3E2 137 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 GPSM3Q9Y4H4 160 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 POLR3HQ9Y535 204 aaPredicted RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 OR4F21O95013 312 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 FADS2O95864 444 aaKnown RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 ACVRL1P37023 503 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 TUSC3Q13454 348 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 DAG1Q14118 895 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 SMU1Q2TAY7 513 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 TTLL9Q3SXZ7 439 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 WDR45BQ5MNZ6 344 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 ATL1Q8WXF7 558 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 RASSF1Q9NS23 344 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 POLG2Q9UHN1 485 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 EIF2B4Q9UI10 523 aaKnown RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 GOT2P00505 430 aaKnown RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 HSPA7P48741 367 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 ST13P50502 369 aaKnown RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 ASCC1Q8N9N2 400 aaKnown RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 LRRC58Q96CX6 371 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 GPR22Q99680 433 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 FEM1AQ9BSK4 669 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 MLPHQ9BV36 600 aaPredicted RBP17.64■□□□□ 0.41
LTBP3-210ENST00000528516 C8orf4Q9NR00 106 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 ADPRHL2Q9NX46 363 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 CMTM6Q9NX76 183 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms