RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 LATS2Q9NRM7 1088 aa22.98■■□□□ 1.27
CPSF1-202ENST00000527827 DDX56Q9NY93 547 aaKnown RBP22.98■■□□□ 1.27
CPSF1-202ENST00000527827 HYOU1Q9Y4L1 999 aa22.98■■□□□ 1.27
CPSF1-202ENST00000527827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.98■■□□□ 1.273e-11■□□□□ 11.3
CPSF1-202ENST00000527827 PRRC2CQ9Y520 2896 aaKnown RBP22.98■■□□□ 1.27
CPSF1-202ENST00000527827 SYCE3A1L190 88 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 OR6C74A6NCV1 312 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 MGAT4DA6NG13 374 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 CEACAM4O75871 244 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 ARCN1P48444 511 aaKnown RBP22.97■■□□□ 1.27
CPSF1-202ENST00000527827 BZW1Q7L1Q6 419 aaKnown RBP22.97■■□□□ 1.27
CPSF1-202ENST00000527827 DET1Q7L5Y6 550 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 CARFQ8N187 725 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 LRFN5Q96NI6 719 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 DNAJC7Q99615 494 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 DEF6Q9H4E7 631 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 KIR3DX1Q9H7L2 352 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 BTRCQ9Y297 605 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 PKP3Q9Y446 797 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 SEC16AO15027 2179 aa22.97■■□□□ 1.27
CPSF1-202ENST00000527827 AKR1B10O60218 316 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 CST8O60676 142 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 SEMA7AO75326 666 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 RNF224P0DH78 156 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 TNNT1P13805 278 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 HLA-DPA1P20036 260 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 MSH3P20585 1137 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 ADCY2Q08462 1091 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 LLGL1Q15334 1064 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 LONRF2Q1L5Z9 754 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 ODF2Q5BJF6 829 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 PLEKHS1Q5SXH7 462 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 TMTC4Q5T4D3 741 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 RHOT2Q8IXI1 618 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 ZNF567Q8N184 647 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 IPMKQ8NFU5 416 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 OR8K1Q8NGG5 319 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 OR2L2Q8NH16 312 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 ZNF398Q8TD17 642 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 KLHL8Q9P2G9 620 aaPredicted RBP22.96■■□□□ 1.27
CPSF1-202ENST00000527827 ACSL5Q9ULC5 683 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 HIVEP3Q5T1R4 2406 aa22.96■■□□□ 1.27
CPSF1-202ENST00000527827 DDX3YO15523 660 aaKnown RBP22.95■■□□□ 1.26
CPSF1-202ENST00000527827 KLK3P07288 261 aaPredicted RBP22.95■■□□□ 1.26
CPSF1-202ENST00000527827 RAB40ALP0C0E4 278 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 AKT1P31749 480 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 SLC1A1P43005 524 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 ABRQ12979 859 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 TFDP2Q14188 446 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 PRR30Q53SZ7 412 aaPredicted RBP22.95■■□□□ 1.26
CPSF1-202ENST00000527827 FAM69BQ5VUD6 431 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 ARMC6Q6NXE6 501 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 PID1Q7Z2X4 250 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 DSELQ8IZU8 1212 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 ENDOVQ8N8Q3 282 aaKnown RBP22.95■■□□□ 1.26
CPSF1-202ENST00000527827 SSC4DQ8WTU2 575 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 RMDN2Q96LZ7 410 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 TLR10Q9BXR5 811 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 SPTLC3Q9NUV7 552 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 SOHLH2Q9NX45 425 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 FAM8A1Q9UBU6 413 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 ZNF451Q9Y4E5 1061 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 PCDHGB7Q9Y5F8 929 aa22.95■■□□□ 1.26
CPSF1-202ENST00000527827 PCSK5Q92824 1860 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 GOLGA6L19H0YKK7 550 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 MEN1O00255 615 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 SGTAO43765 313 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 LCA5LO95447 670 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 PRAMEF1O95521 474 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 CAPN1P07384 714 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 POLR2CP19387 275 aaPredicted RBP22.94■■□□□ 1.26
CPSF1-202ENST00000527827 RORAP35398 523 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 TNNT3P45378 269 aaPredicted RBP22.94■■□□□ 1.26
CPSF1-202ENST00000527827 GSDMDP57764 484 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 MPP3Q13368 585 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 INPP5JQ15735 1006 aaPredicted RBP22.94■■□□□ 1.26
CPSF1-202ENST00000527827 KAZNQ674X7 775 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 ZC3H18Q86VM9 953 aaKnown RBP22.94■■□□□ 1.26
CPSF1-202ENST00000527827 LILRA3Q8N6C8 439 aaPredicted RBP22.94■■□□□ 1.26
CPSF1-202ENST00000527827 Q8NA96 180 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 CPT1BQ92523 772 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 CHP1Q99653 195 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 POMT2Q9UKY4 750 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 SNX7Q9UNH6 387 aa22.94■■□□□ 1.26
CPSF1-202ENST00000527827 SLC9B1P1A6NJY1 282 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 STX7O15400 261 aaKnown RBP22.93■■□□□ 1.26
CPSF1-202ENST00000527827 TMEM63AO94886 807 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 SLC35G4P0C7Q5 338 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 COMTP21964 271 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 BCL7AQ4VC05 210 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 ZNF789Q5FWF6 425 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 JMJD6Q6NYC1 403 aaPredicted RBP22.93■■□□□ 1.26
CPSF1-202ENST00000527827 SPOCD1Q6ZMY3 1216 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 FDCSPQ8NFU4 85 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 OR4E2Q8NGC2 313 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 LINC00615Q96LM1 132 aaPredicted RBP22.93■■□□□ 1.26
CPSF1-202ENST00000527827 VAT1Q99536 393 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 NLNQ9BYT8 704 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 LUZP4Q9P127 313 aa22.93■■□□□ 1.26
CPSF1-202ENST00000527827 TCFL5Q9UL49 500 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms