RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HTR1EP28566 365 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 IL12AP29459 219 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 CD70P32970 193 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 CA5AP35218 305 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 NSG1P42857 185 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 PRKCQQ04759 706 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 LIPEQ05469 1076 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 MAD2L1Q13257 205 aaPredicted RBP15.1■□□□□ 0.01
USH1C-207ENST00000527720 DGKKQ5KSL6 1271 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 CDKL4Q5MAI5 379 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 PROSER1Q86XN7 944 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 HID1Q8IV36 788 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 KIAA2013Q8IYS2 634 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 ECHDC3Q96DC8 303 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 CCDC97Q96F63 343 aaPredicted RBP15.1■□□□□ 0.01
USH1C-207ENST00000527720 SCRN2Q96FV2 425 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 CD244Q9BZW8 370 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 JAK1P23458 1154 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 HSPA7P48741 367 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 HTR6P50406 440 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 APLP1P51693 650 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 DEFB103AP81534 67 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 NR6A1Q15406 480 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 C18orf21Q32NC0 220 aaPredicted RBP15.09■□□□□ 0.01
USH1C-207ENST00000527720 TIGD2Q4W5G0 525 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 ZDHHC20Q5W0Z9 365 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 NANOGP8Q6NSW7 305 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 FAM117BQ6P1L5 589 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 CCDC149Q6ZUS6 474 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 CARM1Q86X55 608 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 ADGRG5Q8IZF4 528 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 CLDN19Q8N6F1 224 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 DCBLD1Q8N8Z6 715 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 MFSD2AQ8NA29 543 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 TRPV3Q8NET8 790 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 LMLNQ96KR4 655 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 SLC29A1Q99808 456 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 NTMT1Q9BV86 223 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 ZBP1Q9H171 429 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 TNKS2Q9H2K2 1166 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 NANOGQ9H9S0 305 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 SLC24A3Q9HC58 644 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 TMEM39AQ9NV64 488 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 ELOVL2Q9NXB9 296 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 KCTD5Q9NXV2 234 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 OPTCQ9UBM4 332 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 INTS6Q9UL03 887 aaKnown RBP15.09■□□□□ 0.01
USH1C-207ENST00000527720 CLEC4EQ9ULY5 219 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 AURKCQ9UQB9 309 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 HS3ST2Q9Y278 367 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 ANGPTL3Q9Y5C1 460 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 SLC28A1O00337 649 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 TGM5O43548 720 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 RGS14O43566 566 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 MYCP01106 439 aaPredicted RBP15.09■□□□□ 0.01
USH1C-207ENST00000527720 CTSAP10619 480 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 C7P10643 843 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 SRCP12931 536 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 ITGB6P18564 788 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 UGT1A6P19224 532 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 UGT1A1P22309 533 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 UGT1A4P22310 534 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 GSTT1P30711 240 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 GKP32189 559 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 UGT1A3P35503 534 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 UGT1A5P35504 534 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 PIK3CGP48736 1102 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
USH1C-207ENST00000527720 ROR2Q01974 943 aaKnown RBP15.09■□□□□ 0.01
USH1C-207ENST00000527720 APOFQ13790 326 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 MYLK3Q32MK0 819 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 RABL3Q5HYI8 236 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 CYP20A1Q6UW02 462 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 USP45Q70EL2 814 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 ZSWIM9Q86XI8 627 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 ELMOD1Q8N336 334 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 PAPD5Q8NDF8 572 aaKnown RBP15.09■□□□□ 0.01
USH1C-207ENST00000527720 RHBDF1Q96CC6 855 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 CENPNQ96H22 339 aaPredicted RBP15.09■□□□□ 0.01
USH1C-207ENST00000527720 EGFL8Q99944 293 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 CPEB1Q9BZB8 566 aaKnown RBP15.09■□□□□ 0.01
USH1C-207ENST00000527720 ZDHHC3Q9NYG2 299 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 WWOXQ9NZC7 414 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 TRPS1Q9UHF7 1281 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 COMMD3-BMI1R4GMX3 469 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 PTPRSQ13332 1948 aa15.09■□□□□ 0.01
USH1C-207ENST00000527720 A0A1W2PQ67 120 aa15.08■□□□□ 0
USH1C-207ENST00000527720 NPIPB15A6NHN6 443 aaPredicted RBP15.08■□□□□ 0
USH1C-207ENST00000527720 K7EPI3 171 aa15.08■□□□□ 0
USH1C-207ENST00000527720 ANKRD28O15084 1053 aa15.08■□□□□ 0
USH1C-207ENST00000527720 TFAP2AP05549 437 aa15.08■□□□□ 0
USH1C-207ENST00000527720 CNPP09543 421 aaKnown RBP15.08■□□□□ 0
USH1C-207ENST00000527720 SPATA31D3P0C874 917 aa15.08■□□□□ 0
USH1C-207ENST00000527720 EBLN1P0CF75 366 aa15.08■□□□□ 0
USH1C-207ENST00000527720 VEGFBP49765 207 aa15.08■□□□□ 0
USH1C-207ENST00000527720 POLE2P56282 527 aa15.08■□□□□ 0
USH1C-207ENST00000527720 YBX1P67809 324 aaKnown RBP15.08■□□□□ 0
USH1C-207ENST00000527720 ABRAXAS2Q15018 415 aa15.08■□□□□ 0
USH1C-207ENST00000527720 AP5B1Q2VPB7 878 aa15.08■□□□□ 0
USH1C-207ENST00000527720 CRTC1Q6UUV9 634 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms