RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CLDN25C9JDP6 229 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 H0YJX3 145 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 H3BMM5 538 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CCDC188H7C350 402 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 L7N2F9 121 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 WRBO00258 174 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 WNT10BO00744 389 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PPM1DO15297 605 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GYG2O15488 501 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 RAD51CO43502 376 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 KCNQ3O43525 872 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 BRINP1O60477 761 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GMDSO60547 372 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GAS7O60861 476 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 NDUFS6O75380 124 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ERN1O75460 977 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CCNKO75909 580 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SEMA3DO95025 777 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HRGP04196 525 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ANXA6P08133 673 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ASNSP08243 561 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HBQ1P09105 142 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CBSLP0DN79 551 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SRCP12931 536 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PFKFB1P16118 471 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ARF4P18085 180 aaPredicted RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CHMP24386 653 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 DCKP27707 260 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CIITAP33076 1130 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CBSP35520 551 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HPCAL1P37235 193 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SPAM1P38567 509 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SYKP43405 635 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 LEPRP48357 1165 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 KCNJ5P48544 419 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TPMTP51580 245 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 NDST1P52848 882 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MAPK12P53778 367 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PSMD4P55036 377 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 AQP4P55087 323 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 DCDC1P59894 354 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 RAP2BP61225 183 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HAND2P61296 217 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 YWHAEP62258 255 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MRPS5P82675 430 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MRPS9P82933 396 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 BEX3Q00994 111 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GALNT2Q10471 571 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TEFQ10587 303 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 STRN3Q13033 797 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SGCGQ13326 291 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ITGADQ13349 1161 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 DOC2AQ14183 400 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MXD4Q14582 209 aaPredicted RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CLCA4Q14CN2 919 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PON2Q15165 354 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TTF1Q15361 905 aaPredicted RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PUM3Q15397 648 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 AANATQ16613 207 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 KYNUQ16719 465 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PFKFB4Q16877 469 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 C21orf62-AS1Q17RA5 79 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 IQCCQ4KMZ1 466 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MTX3Q5HYI7 312 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 UBAP2Q5T6F2 1119 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 OGFRL1Q5TC84 451 aaPredicted RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 UBE2UQ5VVX9 321 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC9A4Q6AI14 798 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ANKRD26P1Q6NSI1 321 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 UGT3A1Q6NUS8 523 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TTI2Q6NXR4 508 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 FUT10Q6P4F1 479 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 XKRXQ6PP77 449 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PLEKHG7Q6ZR37 379 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC16A12Q6ZSM3 486 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GPRIN3Q6ZVF9 776 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 STXBP4Q6ZWJ1 553 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 FKBP9P1Q75LS8 142 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 DSG4Q86SJ6 1040 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ARMC8Q8IUR7 673 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 EID3Q8N140 333 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CLEC4FQ8N1N0 589 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 NXPE1Q8N323 547 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SRBD1Q8N5C6 995 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC15A4Q8N697 577 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PLD5Q8N7P1 536 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF610Q8N9Z0 462 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 LEMD2Q8NC56 503 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 RBM15BQ8NDT2 890 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TMIEQ8NEW7 156 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 LPCAT1Q8NF37 534 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 REPS2Q8NFH8 660 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 IL17RDQ8NFM7 739 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF461Q8TAF7 563 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TCP10LQ8TDR4 215 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 C10orf82Q8WW14 230 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 S100ZQ8WXG8 99 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SHC3Q92529 594 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 FIG4Q92562 907 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms