RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ACRV1P26436 265 aa17■□□□□ 0.31
CCS-204ENST00000526066 HSD17B3P37058 310 aa17■□□□□ 0.31
CCS-204ENST00000526066 CDKN1CP49918 316 aaPredicted RBP17■□□□□ 0.31
CCS-204ENST00000526066 KIAA1024LP59773 190 aa17■□□□□ 0.31
CCS-204ENST00000526066 CDK3Q00526 305 aa17■□□□□ 0.31
CCS-204ENST00000526066 SLC29A2Q14542 456 aa17■□□□□ 0.31
CCS-204ENST00000526066 SEMA3AQ14563 771 aa17■□□□□ 0.31
CCS-204ENST00000526066 UAP1Q16222 522 aaPredicted RBP17■□□□□ 0.31
CCS-204ENST00000526066 RNF187Q5TA31 235 aaPredicted RBP17■□□□□ 0.31
CCS-204ENST00000526066 KIAA1614Q5VZ46 1190 aa17■□□□□ 0.31
CCS-204ENST00000526066 ZNF470Q6ECI4 717 aa17■□□□□ 0.31
CCS-204ENST00000526066 MICALCLQ6ZW33 695 aa17■□□□□ 0.31
CCS-204ENST00000526066 TAS2R42Q7RTR8 314 aa17■□□□□ 0.31
CCS-204ENST00000526066 SLC26A11Q86WA9 606 aa17■□□□□ 0.31
CCS-204ENST00000526066 SERPINA9Q86WD7 417 aa17■□□□□ 0.31
CCS-204ENST00000526066 OTUD6BQ8N6M0 293 aa17■□□□□ 0.31
CCS-204ENST00000526066 C2CD4AQ8NCU7 369 aaPredicted RBP17■□□□□ 0.31
CCS-204ENST00000526066 FAM96AQ9H5X1 160 aa17■□□□□ 0.31
CCS-204ENST00000526066 INTS10Q9NVR2 710 aaKnown RBP17■□□□□ 0.31
CCS-204ENST00000526066 ZDHHC3Q9NYG2 299 aa17■□□□□ 0.31
CCS-204ENST00000526066 FBXO5Q9UKT4 447 aa17■□□□□ 0.31
CCS-204ENST00000526066 VPS9D1Q9Y2B5 631 aa17■□□□□ 0.31
CCS-204ENST00000526066 ATMQ13315 3056 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 CACNB4O00305 520 aaPredicted RBP16.99■□□□□ 0.31
CCS-204ENST00000526066 SLC25A14O95258 325 aaPredicted RBP16.99■□□□□ 0.31
CCS-204ENST00000526066 ITGA2BP08514 1039 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 PRSS56P0CW18 603 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 CA5AP35218 305 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 ILF2Q12905 390 aaKnown RBP16.99■□□□□ 0.31
CCS-204ENST00000526066 DBN1Q16643 649 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 KLHL38Q2WGJ6 581 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 KBTBD12Q3ZCT8 623 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 PRRT3Q5FWE3 981 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 BEND6Q5SZJ8 279 aaPredicted RBP16.99■□□□□ 0.31
CCS-204ENST00000526066 PACS1Q6VY07 963 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 MARK2Q7KZI7 788 aaKnown RBP16.99■□□□□ 0.31
CCS-204ENST00000526066 DENND6AQ8IWF6 608 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 FUBP1Q96AE4 644 aaKnown RBP16.99■□□□□ 0.31
CCS-204ENST00000526066 CCNL2Q96S94 520 aaPredicted RBP16.99■□□□□ 0.31
CCS-204ENST00000526066 COPS8Q99627 209 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 ARHGAP9Q9BRR9 750 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 TRIM39Q9HCM9 518 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 SMYD2Q9NRG4 433 aa16.99■□□□□ 0.31
CCS-204ENST00000526066 CDRT15L2A8MXV6 281 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 GPR89AB7ZAQ6 455 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 TMX2-CTNND1H3BSU7 103 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 INPP4BO15327 924 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 VEGFDO43915 354 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 NDUFS3O75489 264 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 WISP1O95388 367 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 S1PR4O95977 384 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 NUDT17P0C025 328 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 GPR89BP0CG08 455 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 KELP23276 732 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 SLC1A2P43004 574 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 LEPRP48357 1165 aaKnown RBP16.98■□□□□ 0.31
CCS-204ENST00000526066 ADARP55265 1226 aaKnown RBP16.98■□□□□ 0.31
CCS-204ENST00000526066 NFATC4Q14934 902 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 C6orf132Q5T0Z8 1188 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 CLEC14AQ86T13 490 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 LRRC6Q86X45 466 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 PHACTR4Q8IZ21 702 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 RBFAQ8N0V3 343 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 CCDC3Q9BQI4 270 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 ZCCHC2Q9C0B9 1178 aaKnown RBP16.98■□□□□ 0.31
CCS-204ENST00000526066 STRADBQ9C0K7 418 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 CAAP1Q9H8G2 361 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 ARFGAP3Q9NP61 516 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 VPS18Q9P253 973 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 FETUBQ9UGM5 382 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 OR1A2Q9Y585 309 aa16.98■□□□□ 0.31
CCS-204ENST00000526066 CXorf49A8MYA2 514 aaPredicted RBP16.97■□□□□ 0.31
CCS-204ENST00000526066 CFAP99D6REC4 459 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 LMO7DNF2Z398 122 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 RALBP11234 206 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 ZNF7P17097 686 aaPredicted RBP16.97■□□□□ 0.31
CCS-204ENST00000526066 NSG1P42857 185 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 BLKP51451 505 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 EIF3IQ13347 325 aaKnown RBP16.97■□□□□ 0.31
CCS-204ENST00000526066 CTBP1Q13363 440 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 PERM1Q5SV97 790 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 LDB1Q86U70 411 aaPredicted RBP16.97■□□□□ 0.31
CCS-204ENST00000526066 CTAGE3PQ8IX95 158 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 GDAP1Q8TB36 358 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 LPGAT1Q92604 370 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 DCUN1D1Q96GG9 259 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 CPNE1Q99829 537 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 CCDC77Q9BR77 488 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 BOCQ9BWV1 1114 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 LGR4Q9BXB1 951 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 PPCSQ9HAB8 311 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 ATXN7L1Q9ULK2 861 aaPredicted RBP16.97■□□□□ 0.31
CCS-204ENST00000526066 PADI4Q9UM07 663 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
CCS-204ENST00000526066 OAS3Q9Y6K5 1087 aaKnown RBP16.97■□□□□ 0.31
CCS-204ENST00000526066 PYCARD-AS1I3L0S3 204 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 PRMT5O14744 637 aaPredicted RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 TNFRSF10CO14798 259 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 MSH3P20585 1137 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 RPS3P23396 243 aaKnown RBP eCLIP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms