RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 PIEZO2Q9H5I5 2752 aa16.62■□□□□ 0.25
CCS-203ENST00000526058 C17orf113A0A1B0GUU1 675 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 GOT2P00505 430 aaKnown RBP16.61■□□□□ 0.25
CCS-203ENST00000526058 ANKRD34CP0C6C1 535 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 SLC35G4P0C7Q5 338 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 CD82P27701 267 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 SEPHS1P49903 392 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 TERF1P54274 439 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 SESN2P58004 480 aaPredicted RBP16.61■□□□□ 0.25
CCS-203ENST00000526058 MC2RQ01718 297 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 ACVR1Q04771 509 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 VAC14Q08AM6 782 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 CAPRIN2Q6IMN6 1127 aaKnown RBP16.61■□□□□ 0.25
CCS-203ENST00000526058 IRGCQ6NXR0 463 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 TTC27Q6P3X3 843 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 CCDC81Q6ZN84 652 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 FAM92BQ6ZTR7 304 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 SLC35F6Q8N357 371 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 PBKQ96KB5 322 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 CCNL2Q96S94 520 aaPredicted RBP16.61■□□□□ 0.25
CCS-203ENST00000526058 CCM2Q9BSQ5 444 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 DDA1Q9BW61 102 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 AP1M1Q9BXS5 423 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 COG4Q9H9E3 785 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 APMAPQ9HDC9 416 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 EIF2B3Q9NR50 452 aaKnown RBP16.61■□□□□ 0.25
CCS-203ENST00000526058 CHRAC1Q9NRG0 131 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 HOMER3Q9NSC5 361 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 TRMT1Q9NXH9 659 aaKnown RBP16.61■□□□□ 0.25
CCS-203ENST00000526058 RIMKLBQ9ULI2 386 aa16.61■□□□□ 0.25
CCS-203ENST00000526058 TCRBV7S3A2A0A539 114 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 PDHA2P29803 388 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 NSG1P42857 185 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 RAB15P59190 212 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 CRADDP78560 199 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 LAMB3Q13751 1172 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 GSE1Q14687 1217 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 PLCL1Q15111 1095 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 DCAF12Q5T6F0 453 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 C4orf22Q6V702 233 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 ZNF534Q76KX8 674 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 VASH2Q86V25 355 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 OR6P1Q8NGX9 317 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 OR4L1Q8NH43 312 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 ASPSCR1Q9BZE9 553 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 OR52A5Q9H2C5 316 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 FBXO8Q9NRD0 319 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 EPHA6Q9UF33 1036 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 TTC7AQ9ULT0 858 aaPredicted RBP16.6■□□□□ 0.25
CCS-203ENST00000526058 CFAP46Q8IYW2 2715 aa16.6■□□□□ 0.25
CCS-203ENST00000526058 TEX51A0A1B0GUA7 166 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.59■□□□□ 0.25
CCS-203ENST00000526058 STMND1H3BQB6 276 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 K7ENP7 123 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 OR1I1O60431 355 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 RASSF9O75901 435 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 AP2A2O94973 939 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 PREPP48147 710 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 VPS41P49754 854 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 SH3BP2P78314 561 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 SEMA3AQ14563 771 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 ITIH4Q14624 930 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 PCID2Q5JVF3 399 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 CACHD1Q5VU97 1274 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 INO80CQ6PI98 192 aaPredicted RBP16.59■□□□□ 0.25
CCS-203ENST00000526058 AFTPHQ6ULP2 937 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 NLRP9Q7RTR0 991 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 PPHLN1Q8NEY8 458 aaKnown RBP16.59■□□□□ 0.25
CCS-203ENST00000526058 COG1Q8WTW3 980 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 SNRNP27Q8WVK2 155 aaKnown RBP16.59■□□□□ 0.25
CCS-203ENST00000526058 ZDHHC12Q96GR4 267 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 RAB33BQ9H082 229 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 SIDT1Q9NXL6 827 aaKnown RBP16.59■□□□□ 0.25
CCS-203ENST00000526058 SLC24A2Q9UI40 661 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 PCDHB11Q9Y5F2 797 aa16.59■□□□□ 0.25
CCS-203ENST00000526058 TOX3O15405 576 aaPredicted RBP16.58■□□□□ 0.24
CCS-203ENST00000526058 KRT14P02533 472 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 FOXM1Q08050 763 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 MANEAQ5SRI9 462 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 CEACAM20Q6UY09 585 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 PACS1Q6VY07 963 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 NAPRTQ6XQN6 538 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 PRSS42Q7Z5A4 293 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 ZFPM2Q8WW38 1151 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 NKD1Q969G9 470 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCS-203ENST00000526058 MAGOHBQ96A72 148 aaKnown RBP16.58■□□□□ 0.24
CCS-203ENST00000526058 UBL7Q96S82 380 aaPredicted RBP16.58■□□□□ 0.24
CCS-203ENST00000526058 OSBPL9Q96SU4 736 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 NRTNQ99748 197 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 SPRY4Q9C004 299 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 ZNF768Q9H5H4 540 aaKnown RBP16.58■□□□□ 0.24
CCS-203ENST00000526058 KIR3DX1Q9H7L2 352 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 VPS37BQ9H9H4 285 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 HRASLS2Q9NWW9 162 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 COLEC10Q9Y6Z7 277 aa16.58■□□□□ 0.24
CCS-203ENST00000526058 IGHV5-51A0A0C4DH38 117 aa16.57■□□□□ 0.24
CCS-203ENST00000526058 OR5K3A6NET4 321 aa16.57■□□□□ 0.24
CCS-203ENST00000526058 USP27XA6NNY8 438 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms