RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 FTOQ9C0B1 505 aaKnown RBP eCLIP1.66□□□□□ -2.14
CD44-212ENST00000524922 BRD8Q9H0E9 1235 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 CSTL1Q9H114 145 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 BICC1Q9H694 974 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 NLRC4Q9NPP4 1024 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 CYP39A1Q9NYL5 469 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 HMG20BQ9P0W2 317 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 SIX4Q9UIU6 781 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 BAG5Q9UL15 447 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 RAB23Q9ULC3 237 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 BSNQ9UPA5 3926 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 GBF1Q92538 1859 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 NAV3Q8IVL0 2385 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 PARP14Q460N5 1801 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 CSMD1Q96PZ7 3565 aa1.65□□□□□ -2.14
CD44-212ENST00000524922 POLQO75417 2590 aa1.65□□□□□ -2.14
CD44-212ENST00000524922 SETD2Q9BYW2 2564 aaPredicted RBP1.65□□□□□ -2.14
CD44-212ENST00000524922 ITPR2Q14571 2701 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 hDV102S1A0JD36 115 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 FAM90A7PA6NKC0 464 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 FAM90A22PA8MWA6 464 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 FAM90A12PA8MX19 464 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 FAM90A23PA8MXZ1 464 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 C2CD4DB7Z1M9 353 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 E7EVH7 732 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 IPO5O00410 1097 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 CAPN9O14815 690 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 DHX16O60231 1041 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 RFPL2O75678 378 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 EIF3JO75822 258 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 KCNK5O95279 499 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 BAG4O95429 457 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 CBX6O95503 412 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 GH1P01241 217 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 CRYAAP02489 173 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 PGK2P07205 417 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 NBPF7P0C2Y1 421 aaPredicted RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 ZNF883P0CG24 379 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MCM3P25205 808 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 HNRNPH1P31943 449 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 CCR10P46092 362 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 SLC26A2P50443 739 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 PEX5P50542 639 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 STAT2P52630 851 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 ATP12AP54707 1039 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MGAT3Q09327 533 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 SMC1AQ14683 1233 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 KARSQ15046 597 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 RPS6KA2Q15349 733 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 KRT24Q2M2I5 525 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 SOWAHAQ2M3V2 549 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 ALDH1L2Q3SY69 923 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 AMZ1Q400G9 498 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 DCAF6Q58WW2 860 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 CCDC181Q5TID7 509 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 JMJD6Q6NYC1 403 aaPredicted RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 GDPD4Q6W3E5 623 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 SYNE3Q6ZMZ3 975 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 RINLQ6ZS11 566 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 TOGARAM2Q6ZUX3 1019 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 NEK10Q6ZWH5 1172 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MTSS1LQ765P7 747 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 SHFQ7M4L6 423 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 DEFB128Q7Z7B8 93 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 GLRX5Q86SX6 157 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 LONP2Q86WA8 852 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MYOCDQ8IZQ8 938 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 LRRC43Q8N309 656 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 SPEM1Q8N4L4 309 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MRPL43Q8N983 215 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 FSIP1Q8NA03 581 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 DBF4BQ8NFT6 615 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 TET1Q8NFU7 2136 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 SVIPQ8NHG7 77 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 KCNG4Q8TDN1 519 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 ACER1Q8TDN7 264 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 CREB3L4Q8TEY5 395 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 POF1BQ8WVV4 589 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MRPS27Q92552 414 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 ARHGAP45Q92619 1136 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 ERGIC1Q969X5 290 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 RNF183Q96D59 192 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 FEM1CQ96JP0 617 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 C3orf30Q96M34 536 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MYADMQ96S97 322 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 EPYCQ99645 322 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 ELAC2Q9BQ52 826 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 RBM4Q9BWF3 364 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 KRTAP4-3Q9BYR4 195 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 PUS3Q9BZE2 481 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 CRNKL1Q9BZJ0 848 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 USP44Q9H0E7 712 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 KCNN2Q9H2S1 579 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 RANBP17Q9H2T7 1088 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 PLEKHA4Q9H4M7 779 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 TLE6Q9H808 572 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 TBC1D17Q9HA65 648 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 ZNF334Q9HCZ1 680 aaPredicted RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms