RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SLC24A2Q9UI40 661 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 SLC9B1P1A6NJY1 282 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 C3orf70A6NLC5 250 aaPredicted RBP25.26■■□□□ 1.63
PVT1-219ENST00000523427 SPTBP11277 2137 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 NFKB1P19838 968 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 MSH3P20585 1137 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 CDH3P22223 829 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 PBX1P40424 430 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 ITGA1P56199 1179 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 GSDMDP57764 484 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 PTPRCAPQ14761 206 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 SLC14A2Q15849 920 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 KYNUQ16719 465 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 METRNLQ641Q3 311 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 SLC6A19Q695T7 634 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 OR4E2Q8NGC2 313 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 ADAMTS17Q8TE56 1095 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 CPT1BQ92523 772 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 C19orf60Q96EN9 201 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 TEKT5Q96M29 485 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 TRABDQ9H4I3 376 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 IL17CQ9P0M4 197 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 TCFL5Q9UL49 500 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 NENFQ9UMX5 172 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 ITPR2Q14571 2701 aa25.26■■□□□ 1.63
PVT1-219ENST00000523427 ZFXP17010 805 aaPredicted RBP25.25■■□□□ 1.63
PVT1-219ENST00000523427 CD68P34810 354 aaPredicted RBP25.25■■□□□ 1.63
PVT1-219ENST00000523427 ABRQ12979 859 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 LONRF2Q1L5Z9 754 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 ZDHHC20Q5W0Z9 365 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 GLT6D1Q7Z4J2 308 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 RHOT1Q8IXI2 618 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 DSELQ8IZU8 1212 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 RBMXL3Q8N7X1 1067 aaKnown RBP25.25■■□□□ 1.63
PVT1-219ENST00000523427 DDHD1Q8NEL9 900 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 OR8K5Q8NH50 307 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 SLC7A5P2Q9GIP4 190 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 FANCEQ9HB96 536 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 GPR83Q9NYM4 423 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 PKP3Q9Y446 797 aa25.25■■□□□ 1.63
PVT1-219ENST00000523427 DNMT3AQ9Y6K1 912 aaPredicted RBP25.25■■□□□ 1.63
PVT1-219ENST00000523427 HIVEP3Q5T1R4 2406 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 CEACAM4O75871 244 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 SLC35G4P0C7Q5 338 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 HLA-DPA1P20036 260 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 VAV2P52735 878 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 PRKAA1Q13131 559 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 PTCHD3Q3KNS1 767 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 KDELC1Q6UW63 502 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 ZNF517Q6ZMY9 492 aaPredicted RBP25.24■■□□□ 1.63
PVT1-219ENST00000523427 IPMKQ8NFU5 416 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 NLNQ9BYT8 704 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 KLHL25Q9H0H3 589 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 LCMT1Q9UIC8 334 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 PCDHGB7Q9Y5F8 929 aa25.24■■□□□ 1.63
PVT1-219ENST00000523427 LOC285095A0A1B0GVY8 99 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 GSAPA4D1B5 854 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 MGAT4DA6NG13 374 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 TMEM150CB9EJG8 249 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 DDAH2O95865 285 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 GYPCP04921 128 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 TPM4P67936 248 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 ATP1A4Q13733 1029 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 ITGA9Q13797 1035 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 CAVIN1Q6NZI2 390 aaKnown RBP25.23■■□□□ 1.63
PVT1-219ENST00000523427 LUZP1Q86V48 1076 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 ZBTB2Q8N680 514 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 OR1L3Q8NH93 324 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 SLC35G2Q8TBE7 412 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 ZNF398Q8TD17 642 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 ACTR5Q9H9F9 607 aaPredicted RBP25.23■■□□□ 1.63
PVT1-219ENST00000523427 KLHL8Q9P2G9 620 aaPredicted RBP25.23■■□□□ 1.63
PVT1-219ENST00000523427 BTRCQ9Y297 605 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 HYOU1Q9Y4L1 999 aa25.23■■□□□ 1.63
PVT1-219ENST00000523427 SSU72P8A0A1W2PR75 194 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 ZNF487B1APH4 448 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 RAB40ALP0C0E4 278 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 CYP2A7P20853 494 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 OTX2P32243 289 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 PREPP48147 710 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 NR6A1Q15406 480 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 SYTL1Q8IYJ3 562 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 CFAP206Q8IYR0 622 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 LILRA3Q8N6C8 439 aaPredicted RBP25.22■■□□□ 1.63
PVT1-219ENST00000523427 TFB1MQ8WVM0 346 aaKnown RBP25.22■■□□□ 1.63
PVT1-219ENST00000523427 PNPLA2Q96AD5 504 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 RMDN2Q96LZ7 410 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 LRFN5Q96NI6 719 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 DEF6Q9H4E7 631 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 KIR3DX1Q9H7L2 352 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 PCMTD2Q9NV79 361 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.22■■□□□ 1.634e-6■□□□□ 11.2
PVT1-219ENST00000523427 HACD3Q9P035 362 aa25.22■■□□□ 1.63
PVT1-219ENST00000523427 GAPDHSO14556 408 aaPredicted RBP25.21■■□□□ 1.63
PVT1-219ENST00000523427 STX7O15400 261 aaKnown RBP25.21■■□□□ 1.63
PVT1-219ENST00000523427 WASHC5Q12768 1159 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 PRKD1Q15139 912 aaPredicted RBP25.21■■□□□ 1.63
PVT1-219ENST00000523427 KAZNQ674X7 775 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 MFSD7Q6UXD7 560 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 PID1Q7Z2X4 250 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms