RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 FBXO39Q8N4B4 442 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 LILRA3Q8N6C8 439 aaPredicted RBP6.6□□□□□ -1.35
PVT1-217ENST00000523190 CCDC197Q8NCU1 140 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 OR2T34Q8NGX1 318 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 RFWD2Q8NHY2 731 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 RHEBL1Q8TAI7 183 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 STAG3L4Q8TBR4 150 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 FOXJ1Q92949 421 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 CCDC126Q96EE4 140 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 PDLIM5Q96HC4 596 aaKnown RBP6.6□□□□□ -1.35
PVT1-217ENST00000523190 SEC16BQ96JE7 1060 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 C7orf26Q96N11 449 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 SORT1Q99523 831 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 CCM2Q9BSQ5 444 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 C1QTNF7Q9BXJ2 289 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 TEX101Q9BY14 249 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 FAM126AQ9BYI3 521 aaPredicted RBP6.6□□□□□ -1.35
PVT1-217ENST00000523190 WDR26Q9H7D7 661 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 SGK2Q9HBY8 427 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 TRIM39Q9HCM9 518 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 NPHS2Q9NP85 383 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 PHPT1Q9NRX4 125 aaPredicted RBP6.6□□□□□ -1.35
PVT1-217ENST00000523190 THAP1Q9NVV9 213 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 UTP6Q9NYH9 597 aaKnown RBP6.6□□□□□ -1.35
PVT1-217ENST00000523190 NUDT4Q9NZJ9 180 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 CD274Q9NZQ7 290 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 KLHL42Q9P2K6 505 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 CDYLQ9Y232 598 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 CA5BQ9Y2D0 317 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 PRKAB1Q9Y478 270 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 OR1A2Q9Y585 309 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 PCYT1BQ9Y5K3 369 aaPredicted RBP6.6□□□□□ -1.35
PVT1-217ENST00000523190 CDH23Q9H251 3354 aa6.6□□□□□ -1.35
PVT1-217ENST00000523190 SLC5A10A0PJK1 596 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 CCDC189A1A4V9 331 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 SYCE1LA8MT33 242 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 EIF3FO00303 357 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 VEGFDO43915 354 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 KLK8O60259 260 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 NUAK1O60285 661 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 NPHS1O60500 1241 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 SNX2O60749 519 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 GPC4O75487 556 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 POP7O75817 140 aaKnown RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 SUPT7LO94864 414 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 SIX3O95343 332 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 GUCA1CO95843 209 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 S100BP04271 92 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 MYCLP1P12525 358 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 TSPAN8P19075 237 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 HNRNPA2B1P22626 353 aaKnown RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 EEF1DP29692 281 aaKnown RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 TRIM23P36406 574 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 PREPP48147 710 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 PXNP49023 591 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 CLDN2P57739 230 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 TGFBIQ15582 683 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 ZSCAN26Q16670 478 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 PHKG1Q16816 387 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 PPP1R3AQ16821 1122 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 C18orf21Q32NC0 220 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 ZNF658BQ4V348 819 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 UNC50Q53HI1 259 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 CFAP157Q5JU67 520 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 ZNF678Q5SXM1 525 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 FAM219BQ5XKK7 198 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 KIAA0895LQ68EN5 471 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 MBOAT1Q6ZNC8 495 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 UBE2R2Q712K3 238 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 RAB44Q7Z6P3 723 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 ZNF547Q8IVP9 402 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 LSMEM2Q8N112 164 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 FRMD1Q8N878 549 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 ZNF781Q8N8C0 355 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 DENND6BQ8NEG7 585 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 PJA1Q8NG27 643 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 AGR3Q8TD06 166 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 PPP4R1Q8TF05 950 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 SKA2Q8WVK7 121 aaPredicted RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 C10orf82Q8WW14 230 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 RLN3Q8WXF3 142 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 ASB12Q8WXK4 309 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 DLG3Q92796 817 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 ESAMQ96AP7 390 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 TMEM159Q96B96 161 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 GRAMD1AQ96CP6 724 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 L3HYPDHQ96EM0 354 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 TOE1Q96GM8 510 aaKnown RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 NSUN5Q96P11 429 aaKnown RBP6.59□□□□□ -1.35
PVT1-217ENST00000523190 NELL2Q99435 816 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 EGFL8Q99944 293 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 APOOQ9BUR5 198 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 GPR174Q9BXC1 333 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 TRIM55Q9BYV6 548 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 SHCBP1LQ9BZQ2 653 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 DRC3Q9H069 523 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 CHRDQ9H2X0 955 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 GSTO2Q9H4Y5 243 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 EPHX3Q9H6B9 360 aa6.59□□□□□ -1.35
PVT1-217ENST00000523190 C6orf106Q9H6K1 298 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms