RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 KCNK6Q9Y257 313 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 TMEM98Q9Y2Y6 226 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 ZNF451Q9Y4E5 1061 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 SCINQ9Y6U3 715 aa6.15□□□□□ -1.42
PABPC1-220ENST00000522658 UNC13CQ8NB66 2214 aa6.15□□□□□ -1.43
PABPC1-220ENST00000522658 LRRK1Q38SD2 2015 aa6.15□□□□□ -1.43
PABPC1-220ENST00000522658 COL12A1Q99715 3063 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 C1orf232A0A0U1RR37 186 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 NPIPB15A6NHN6 443 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 C21orf140B9A014 251 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TRAFD1O14545 582 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 HTRA2O43464 458 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 NRDCO43847 1150 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 DPM1O60762 260 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TRIM13O60858 407 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 CREG1O75629 220 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 UBXN7O94888 489 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 PGLSO95336 258 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 SLC4A1P02730 911 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 ANKRD34CP0C6C1 535 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 F3P13726 295 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TYRP1P17643 537 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 HALP42357 657 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 SSR1P43307 286 aaKnown RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 CDH6P55285 790 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 MAXP61244 160 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 DPTQ07507 201 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TUBB3Q13509 450 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 GTF2H3Q13889 308 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 KRT81Q14533 505 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 IL11RAQ14626 422 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 CHRNA6Q15825 494 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 SEPT7Q16181 437 aaKnown RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 PYCR3Q53H96 274 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 MIIPQ5JXC2 388 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 ZFYVE27Q5T4F4 411 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 CACHD1Q5VU97 1274 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 CAPRIN2Q6IMN6 1127 aaKnown RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TIGD7Q6NT04 549 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 ARMC6Q6NXE6 501 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 IRGCQ6NXR0 463 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 KLHL35Q6PF15 583 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 RNF111Q6ZNA4 994 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 MON1BQ7L1V2 547 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TSPAN33Q86UF1 283 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TTC30BQ8N4P2 665 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 BMPERQ8N8U9 685 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 THAP4Q8WY91 577 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 HSPH1Q92598 858 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 RNF31Q96EP0 1072 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 SCRN2Q96FV2 425 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 ZDHHC12Q96GR4 267 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF830Q96NB3 372 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 MGME1Q9BQP7 344 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 RSRP1Q9BUV0 290 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TBC1D10AQ9BXI6 508 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 MAGEB5Q9BZ81 275 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 POLR1EQ9GZS1 481 aaKnown RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 ACTL8Q9H568 366 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 ZCCHC4Q9H5U6 513 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 RMI1Q9H9A7 625 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 NT5MQ9NPB1 228 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 CPNE7Q9UBL6 633 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 TLK1Q9UKI8 766 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 RARRES3Q9UL19 164 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 PADI1Q9ULC6 663 aa6.14□□□□□ -1.43
PABPC1-220ENST00000522658 MN1Q10571 1320 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-220ENST00000522658 BSNQ9UPA5 3926 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TMEM82A0PJX8 343 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CLEC18AA5D8T8 446 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 OR14I1A6ND48 311 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ARGFXA6NJG6 315 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TMCO5BA8MYB1 307 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 RGS13O14921 159 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TOX3O15405 576 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 GRID2O43424 1007 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 SPAG6O75602 509 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ATP1A1P05023 1023 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 UNGP13051 313 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ATP1A3P13637 1013 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 FERP16591 822 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TNFAIP3P21580 790 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 LHCGRP22888 699 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CAPZBP47756 277 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CCL11P51671 97 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 RRADP55042 308 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 GFERP55789 205 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 RPL7AP62424 266 aaKnown RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 ACY1Q03154 408 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 SLC10A7Q0GE19 358 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 TRAF2Q12933 501 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 MPP2Q14168 576 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 KYNUQ16719 465 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 SMTNL2Q2TAL5 461 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 DPCR1Q3MIW9 517 aa6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CT47A1Q5JQC4 288 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-220ENST00000522658 HIST2H2BCQ6DN03 193 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms