RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 LTA4HP09960 611 aaKnown RBP13.13□□□□□ -0.31
CLK4-210ENST00000522136 OAS2P29728 719 aaKnown RBP13.13□□□□□ -0.31
CLK4-210ENST00000522136 CRHR1P34998 444 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 CCT5P48643 541 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 IRX4P78413 519 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 GBX1Q14549 363 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 SYTL3Q4VX76 610 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 PLEKHS1Q5SXH7 462 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 IQCHQ86VS3 1027 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 CNPY4Q8N129 248 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 NKAPQ8N5F7 415 aaKnown RBP13.13□□□□□ -0.31
CLK4-210ENST00000522136 ANKRD42Q8N9B4 389 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 FAM174AQ8TBP5 190 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 MDM1Q8TC05 714 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 ASZ1Q8WWH4 475 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 PIGKQ92643 395 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 ALKBH8Q96BT7 664 aaKnown RBP13.13□□□□□ -0.31
CLK4-210ENST00000522136 PKNOX2Q96KN3 472 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 OR2M4Q96R27 311 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 TMEM168Q9H0V1 697 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 COG4Q9H9E3 785 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 DCDC2Q9UHG0 476 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 EMCNQ9ULC0 261 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
CLK4-210ENST00000522136 C17orf113A0A1B0GUU1 675 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 A0A1B0GVT2 93 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 CDC7O00311 574 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 KPNA5O15131 536 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 VILLO15195 856 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 SLCO2B1O94956 709 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 CD1DP15813 335 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 NR1D1P20393 614 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 DGKAP23743 735 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 AFF3P51826 1226 aaKnown RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 HK3P52790 923 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 TTLL9Q3SXZ7 439 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 N4BP2L1Q5TBK1 243 aaPredicted RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 CYHR1Q6ZMK1 362 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 DCP2Q8IU60 420 aaKnown RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 OXR1Q8N573 874 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 HM13Q8TCT9 377 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 TMEM159Q96B96 161 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 PTERQ96BW5 349 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 LRFN3Q9BTN0 628 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 MLXIPLQ9NP71 852 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 DNAJC28Q9NX36 388 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 KLHL42Q9P2K6 505 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 PILRBQ9UKJ0 227 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 DNMT3AQ9Y6K1 912 aaPredicted RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 ARHGEF17Q96PE2 2063 aaPredicted RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 PRPF4O43172 522 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLK4-210ENST00000522136 GLRA3O75311 464 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 TNFP01375 233 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 COL6A2P12110 1019 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 TFEBP19484 476 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 AK4P27144 223 aaPredicted RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 KCNC1P48547 511 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 RGS4P49798 205 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 NXPH1P58417 271 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 PPP2R2AP63151 447 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 OVGP1Q12889 678 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 FAM83EQ2M2I3 478 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 AGAP9Q5VTM2 703 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 MGARPQ8TDB4 240 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 SKA2Q8WVK7 121 aaPredicted RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 FAM111AQ96PZ2 611 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 DERL2Q9GZP9 239 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 ALG9Q9H6U8 611 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 SSU72Q9NP77 194 aaKnown RBP13.12□□□□□ -0.31
CLK4-210ENST00000522136 MKS1Q9NXB0 559 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 GRID1Q9ULK0 1009 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 PSMD13Q9UNM6 376 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 PLLPQ9Y342 182 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 DGKBQ9Y6T7 804 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 WDFY4Q6ZS81 3184 aa13.12□□□□□ -0.31
CLK4-210ENST00000522136 TMEM131Q92545 1883 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 A0A1B0GTW7 788 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 NPEPPSL1A6NEC2 478 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 BTN3A1O00481 513 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 CELA2BP08218 269 aaPredicted RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 GSTA1P08263 222 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 SLC26A3P40879 764 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 ATP1A2P50993 1020 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 C21orf59P57076 290 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 CTBSQ01459 385 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 ABRQ12979 859 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 OR4D1Q15615 310 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 SEPT7Q16181 437 aaKnown RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 METRNLQ641Q3 311 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 CCDC91Q7Z6B0 441 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 ISCA2Q86U28 154 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 PARGQ86W56 976 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 PHACTR4Q8IZ21 702 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 FSTL5Q8N475 847 aaPredicted RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 TSNARE1Q96NA8 513 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 TIMM29Q9BSF4 260 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms