RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 CKMT2P17540 419 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 DNASE1P24855 282 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 MARK3P27448 753 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 LIG4P49917 911 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 MMP15P51511 669 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 SIRPAP78324 504 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 RBBP5Q15291 538 aaKnown RBP4.87□□□□□ -1.63
SKP1-208ENST00000521216 KLC3Q6P597 504 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 C16orf54Q6UWD8 224 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 CIARTQ8N365 385 aaPredicted RBP4.87□□□□□ -1.63
SKP1-208ENST00000521216 MINDY1Q8N5J2 469 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 CCDC89Q8N998 374 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 LRRC8CQ8TDW0 803 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 LPGAT1Q92604 370 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 TMCO6Q96DC7 493 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 MTERF3Q96E29 417 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 ALG14Q96F25 216 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 SLX1AQ9BQ83 275 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 SLF1Q9BQI6 1058 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 FNDC11Q9BVV2 318 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 ANKEF1Q9NU02 776 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 NPAP1Q9NZP6 1156 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 CNTNAP2Q9UHC6 1331 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 KAT6BQ8WYB5 2073 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 TO15178 435 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 PDE9AO76083 593 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 BAG4O95429 457 aaKnown RBP4.86□□□□□ -1.63
SKP1-208ENST00000521216 PHEXP78562 749 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 CALD1Q05682 793 aaKnown RBP4.86□□□□□ -1.63
SKP1-208ENST00000521216 GAGE5Q13069 117 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 GAGE6Q13070 117 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 GARNL3Q5VVW2 1013 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 TMEM211Q6ICI0 200 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 TEX38Q6PEX7 206 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 FIGLAQ6QHK4 219 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 NFE4Q86UQ8 179 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 GUF1Q8N442 669 aaKnown RBP4.86□□□□□ -1.63
SKP1-208ENST00000521216 AFAP1Q8N556 730 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 DAZLQ92904 295 aaKnown RBP4.86□□□□□ -1.63
SKP1-208ENST00000521216 ZNF622Q969S3 477 aaKnown RBP eCLIP4.86□□□□□ -1.632e-20■□□□□ 9.4
SKP1-208ENST00000521216 ST6GAL2Q96JF0 529 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 ZNF354BQ96LW1 612 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 OR6C1Q96RD1 312 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 SLC22A12Q96S37 553 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 C16orf70Q9BSU1 422 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 FAM118AQ9NWS6 357 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.86□□□□□ -1.631e-16■■□□□ 11.8
SKP1-208ENST00000521216 FAM169AQ9Y6X4 670 aa4.86□□□□□ -1.63
SKP1-208ENST00000521216 ELOVL7A1L3X0 281 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 P2RY10O00398 339 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 XRCC3O43542 346 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 CREG1O75629 220 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 CAVIN2O95810 425 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 H1F0P07305 194 aaKnown RBP4.85□□□□□ -1.63
SKP1-208ENST00000521216 CBLP22681 906 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 KRT20P35900 424 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 CDH13P55290 713 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 NUCB1Q02818 461 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 PRPF4BQ13523 1007 aaKnown RBP4.85□□□□□ -1.63
SKP1-208ENST00000521216 BAATQ14032 418 aaPredicted RBP4.85□□□□□ -1.63
SKP1-208ENST00000521216 DENND5BQ6ZUT9 1274 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 TRMT1LQ7Z2T5 733 aaKnown RBP4.85□□□□□ -1.63
SKP1-208ENST00000521216 TMEM173Q86WV6 379 aaPredicted RBP4.85□□□□□ -1.63
SKP1-208ENST00000521216 CEP57Q86XR8 500 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 OR2AJ1Q8NGZ0 328 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 TAS1R2Q8TE23 839 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 STAMBPL1Q96FJ0 436 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 NEK1Q96PY6 1258 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 CCDC106Q9BWC9 280 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 GOLPH3LQ9H4A5 285 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 TFB2MQ9H5Q4 396 aaKnown RBP4.85□□□□□ -1.63
SKP1-208ENST00000521216 APOBEC3GQ9HC16 384 aaKnown RBP4.85□□□□□ -1.63
SKP1-208ENST00000521216 RHCGQ9UBD6 479 aa4.85□□□□□ -1.63
SKP1-208ENST00000521216 SPIN1Q9Y657 262 aaPredicted RBP4.85□□□□□ -1.63
SKP1-208ENST00000521216 GREB1LQ9C091 1923 aaPredicted RBP4.84□□□□□ -1.63
SKP1-208ENST00000521216 TEX13DA0A0J9YY54 714 aaPredicted RBP4.84□□□□□ -1.63
SKP1-208ENST00000521216 A0A1W2PPI3 338 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 FAM172BPA6NC97 362 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 P4HA2O15460 535 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 LDLRP01130 860 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 NR3C1P04150 777 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 ABCB1P08183 1280 aaPredicted RBP4.84□□□□□ -1.63
SKP1-208ENST00000521216 NR2F1P10589 423 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 ACP2P11117 423 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 NR1D1P20393 614 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 EPHA2P29317 976 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 RPS18P62269 152 aaKnown RBP4.84□□□□□ -1.63
SKP1-208ENST00000521216 KIR2DS3Q14952 304 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 SNAPC1Q16533 368 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 TMEM266Q2M3C6 531 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 C19orf48Q6RUI8 117 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 FAM114A1Q8IWE2 563 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 CRYBG2Q8N1P7 616 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 SECISBP2LQ93073 1101 aaKnown RBP4.84□□□□□ -1.63
SKP1-208ENST00000521216 C17orf77Q96MU5 243 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 PSD2Q9BQI7 771 aa4.84□□□□□ -1.63
SKP1-208ENST00000521216 TRAF4Q9BUZ4 470 aaPredicted RBP4.84□□□□□ -1.63
SKP1-208ENST00000521216 ABHD6Q9BV23 337 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms