RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 PDE1BQ01064 536 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 MC1RQ01726 317 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 LRMPQ12912 555 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 IKQ13123 557 aaPredicted RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 MAD2L1Q13257 205 aaPredicted RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 SNTA1Q13424 505 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 SOWAHCQ53LP3 525 aaPredicted RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF805Q5CZA5 627 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 FRG2Q64ET8 278 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 KIAA0930Q6ICG6 404 aaPredicted RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 JADE1Q6IE81 842 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 PRR5LQ6MZQ0 368 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 MEX3BQ6ZN04 569 aaKnown RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 ADGRF2Q8IZF7 708 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 HJURPQ8NCD3 748 aaPredicted RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 WBP2Q969T9 261 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 RHBDF1Q96CC6 855 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 BICD1Q96G01 975 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 TMEM19Q96HH6 336 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 PGAM5Q96HS1 289 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF385AQ96PM9 386 aaKnown RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 GAD1Q99259 594 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 PLK3Q9H4B4 646 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 PCDH9Q9HC56 1237 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 MTMR10Q9NXD2 777 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 MCM9Q9NXL9 1143 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF224Q9NZL3 707 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 FBXL17Q9UF56 701 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 VPS28Q9UK41 221 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 FBXW11Q9UKB1 542 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 ACSL5Q9ULC5 683 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 SOS1Q07889 1333 aaPredicted RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 PDS5AQ29RF7 1337 aaKnown RBP3.59□□□□□ -1.83
HDAC2-208ENST00000520746 RNF123Q5XPI4 1314 aa3.59□□□□□ -1.83
HDAC2-208ENST00000520746 TUBGCP6Q96RT7 1819 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 HNRNPCL2B2RXH8 293 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 HS3ST1O14792 307 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 CLGNO14967 610 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 DAB1O75553 588 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 CELF2O95319 508 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 HIST1H2ABP04908 130 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 ICAM1P05362 532 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 SP1P08047 785 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 SRPRAP08240 638 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 ALOX12P18054 663 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 GABRB1P18505 474 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 HIST1H2ADP20671 130 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 HOXD13P35453 343 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 TMPOP42166 694 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 BRWD1-AS2P59051 145 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 CREB5Q02930 508 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 PDE1CQ14123 709 aaPredicted RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 MEA1Q16626 185 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 ASTE1Q2TB18 679 aaPredicted RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 PMS2CLQ68D20 193 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 WBP2NLQ6ICG8 309 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 OLFM4Q6UX06 510 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 CLEC17AQ6ZS10 378 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 HIST3H2AQ7L7L0 130 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 FASTKD5Q7L8L6 764 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 GPR180Q86V85 440 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 HACE1Q8IYU2 909 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 GPC2Q8N158 579 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 C1orf131Q8NDD1 294 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 OR1J2Q8NGS2 313 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 SPATA22Q8NHS9 363 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 HM13Q8TCT9 377 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 DUSP19Q8WTR2 217 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 TAAR8Q969N4 342 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 FAM120BQ96EK7 910 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 EGLN2Q96KS0 407 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 OR2A14Q96R47 310 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 PCYT2Q99447 389 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 SRSF8Q9BRL6 282 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 SIL1Q9H173 461 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 DDX31Q9H8H2 851 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 OGFRQ9NZT2 677 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 STK39Q9UEW8 545 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 ADD3Q9UEY8 706 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 TBC1D29Q9UFV1 150 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 NENFQ9UMX5 172 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 GPR34Q9UPC5 381 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 NIP7Q9Y221 180 aaKnown RBP eCLIP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 VDAC3Q9Y277 283 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 KLHL20Q9Y2M5 609 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 FAM208AQ9UK61 1670 aaKnown RBP3.58□□□□□ -1.84
HDAC2-208ENST00000520746 MON2Q7Z3U7 1717 aa3.58□□□□□ -1.84
HDAC2-208ENST00000520746 KANSL1LA0AUZ9 987 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 MAGEA13PA6NCF6 341 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 PRR23AA6NEV1 266 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 EIF4E1BA6NMX2 242 aaKnown RBP3.57□□□□□ -1.84
HDAC2-208ENST00000520746 OGG1O15527 345 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 KRT36O76013 467 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 TPPPO94811 219 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 IGLV2-11P01706 119 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 C4AP0C0L4 1744 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 RGPD2P0DJD1 1756 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 S1PR1P21453 382 aa3.57□□□□□ -1.84
HDAC2-208ENST00000520746 TAF1P21675 1872 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms