RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 TIPRLO75663 272 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 CCNHP51946 323 aaPredicted RBP25.3■■□□□ 1.64
COL13A1-213ENST00000520267 GK3PQ14409 553 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 HABP4Q5JVS0 413 aaKnown RBP25.3■■□□□ 1.64
COL13A1-213ENST00000520267 ISG20Q96AZ6 181 aaKnown RBP25.3■■□□□ 1.64
COL13A1-213ENST00000520267 CNBD2Q96M20 576 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 SLCO3A1Q9UIG8 710 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 LSM1O15116 133 aaKnown RBP25.3■■□□□ 1.64
COL13A1-213ENST00000520267 KIF1CO43896 1103 aaKnown RBP25.3■■□□□ 1.64
COL13A1-213ENST00000520267 GRIA2P42262 883 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 CASP2P42575 452 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 BNIP2Q12982 314 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 NRF1Q16656 503 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 DPY19L3Q6ZPD9 716 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 USP45Q70EL2 814 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 RHBDF1Q96CC6 855 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 PAWRQ96IZ0 340 aaKnown RBP25.3■■□□□ 1.64
COL13A1-213ENST00000520267 EFHD1Q9BUP0 239 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 CD244Q9BZW8 370 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 HEBP1Q9NRV9 189 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 WWOXQ9NZC7 414 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 SUN2Q9UH99 717 aa25.3■■□□□ 1.64
COL13A1-213ENST00000520267 AP1G1O43747 822 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 HMOX2P30519 316 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 EMX2Q04743 252 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 NR6A1Q15406 480 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 ATP13A5Q4VNC0 1218 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 LRRC73Q5JTD7 316 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 PIP4K2CQ8TBX8 421 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 TRAPPC9Q96Q05 1148 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 ARMC1Q9NVT9 282 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 ZDHHC3Q9NYG2 299 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 C7orf72A4D263 438 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 NEDD8-MDP1E9PL57 170 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 GRM6O15303 877 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 G6PDP11413 515 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 NSG1P42857 185 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 HSPA13P48723 471 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 PTPN5P54829 565 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 ERVFC1P60507 584 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 B4GALNT1Q00973 533 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 CARD16Q5EG05 197 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 IRAK1BP1Q5VVH5 260 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 SULT1C3Q6IMI6 304 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 LCN8Q6JVE9 175 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 ISLR2Q6UXK2 745 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 ZFAND4Q86XD8 727 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 KIAA2013Q8IYS2 634 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 NUDT8Q8WV74 236 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 ACTR3BQ9P1U1 418 aa25.29■■□□□ 1.64
COL13A1-213ENST00000520267 AQP12BA6NM10 295 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 UGT2B4P06133 528 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 GSK3BP49841 420 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 AP5B1Q2VPB7 878 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 MBOAT1Q6ZNC8 495 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 AQP12AQ8IXF9 295 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 CHST14Q8NCH0 376 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 PPWD1Q96BP3 646 aaKnown RBP25.28■■□□□ 1.64
COL13A1-213ENST00000520267 TMEM74Q96NL1 305 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 MCCC1Q96RQ3 725 aaPredicted RBP25.28■■□□□ 1.64
COL13A1-213ENST00000520267 CPEB1Q9BZB8 566 aaKnown RBP25.28■■□□□ 1.64
COL13A1-213ENST00000520267 TRIM15Q9C019 465 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 ACTL8Q9H568 366 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 PIDD1Q9HB75 910 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 LATS2Q9NRM7 1088 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 CCM2LQ9NUG4 571 aaPredicted RBP25.28■■□□□ 1.64
COL13A1-213ENST00000520267 INTS7Q9NVH2 962 aaKnown RBP25.28■■□□□ 1.64
COL13A1-213ENST00000520267 OPTCQ9UBM4 332 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 SLC25A13Q9UJS0 675 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 CCL27Q9Y4X3 112 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 ANGPTL3Q9Y5C1 460 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 ARPC2O15144 300 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 PIK3CGP48736 1102 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 CREB5Q02930 508 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 AAK1Q2M2I8 961 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 RFTN2Q52LD8 501 aaPredicted RBP25.28■■□□□ 1.64
COL13A1-213ENST00000520267 SLC2A7Q6PXP3 512 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 IFNEQ86WN2 208 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 SLC29A1Q99808 456 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 FAM192AQ9GZU8 254 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 ALG2Q9H553 416 aa25.28■■□□□ 1.64
COL13A1-213ENST00000520267 CXorf51AA0A1B0GTR3 108 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 ZBBXA8MT70 800 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 C1SP09871 688 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 PFKLP17858 780 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 PRKG2Q13237 762 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 CYP20A1Q6UW02 462 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 MYLIPQ8WY64 445 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 COPS8Q99627 209 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 CIB1Q99828 191 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 TCF25Q9BQ70 676 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 AURKCQ9UQB9 309 aa25.27■■□□□ 1.64
COL13A1-213ENST00000520267 POLR3HQ9Y535 204 aaPredicted RBP25.27■■□□□ 1.64
COL13A1-213ENST00000520267 HIDE1A8MVS5 230 aa25.26■■□□□ 1.63
COL13A1-213ENST00000520267 FFAR3O14843 346 aa25.26■■□□□ 1.63
COL13A1-213ENST00000520267 GPR42O15529 346 aa25.26■■□□□ 1.63
COL13A1-213ENST00000520267 AKAP10O43572 662 aa25.26■■□□□ 1.63
COL13A1-213ENST00000520267 POP4O95707 220 aaKnown RBP25.26■■□□□ 1.63
COL13A1-213ENST00000520267 LIPEQ05469 1076 aa25.26■■□□□ 1.63
COL13A1-213ENST00000520267 TEAD2Q15562 447 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms