RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SNX15Q9NRS6 342 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 FAM8A1Q9UBU6 413 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 ACSL5Q9ULC5 683 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 CSNK1G3Q9Y6M4 447 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 PCDH15Q96QU1 1955 aa17.46■□□□□ 0.39
SDC2-205ENST00000520233 EIF3FO00303 357 aaPredicted RBP17.45■□□□□ 0.38
SDC2-205ENST00000520233 MAP2K7O14733 419 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 AQP9O43315 295 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 SLCO2B1O94956 709 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 CBSLP0DN79 551 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 EPHA8P29322 1005 aaPredicted RBP17.45■□□□□ 0.38
SDC2-205ENST00000520233 TYK2P29597 1187 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 ATP5DP30049 168 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 CBSP35520 551 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 ACTR1BP42025 376 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 MAGEA12P43365 314 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 ACTR1AP61163 376 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 HSPA14Q0VDF9 509 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 C1orf61Q13536 156 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 PAQR3Q6TCH7 311 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 CCDC91Q7Z6B0 441 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 TAF8Q7Z7C8 310 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 CMC1Q7Z7K0 106 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 GKN2Q86XP6 184 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 CYP4X1Q8N118 509 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 LILRA3Q8N6C8 439 aaPredicted RBP17.45■□□□□ 0.38
SDC2-205ENST00000520233 GLMNQ92990 594 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 GTPBP2Q9BX10 602 aaKnown RBP17.45■□□□□ 0.38
SDC2-205ENST00000520233 OSGEPL1Q9H4B0 414 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 GPAMQ9HCL2 828 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 SEMA4GQ9NTN9 838 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.45■□□□□ 0.38
SDC2-205ENST00000520233 CDYLQ9Y232 598 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 BPTFQ12830 3046 aa17.45■□□□□ 0.38
SDC2-205ENST00000520233 GON4LQ3T8J9 2241 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 TPP1O14773 563 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 PHGDHO43175 533 aaKnown RBP17.44■□□□□ 0.38
SDC2-205ENST00000520233 SDC3O75056 442 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 RFPL1O75677 317 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 WISP3O95389 354 aaPredicted RBP17.44■□□□□ 0.38
SDC2-205ENST00000520233 CELA2BP08218 269 aaPredicted RBP17.44■□□□□ 0.38
SDC2-205ENST00000520233 ZNF37AP17032 561 aaPredicted RBP17.44■□□□□ 0.38
SDC2-205ENST00000520233 KRT15P19012 456 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 DGKAP23743 735 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 CCT8P50990 548 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 PGGT1BP53609 377 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 SPEM2Q0P670 501 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 BNIP3Q12983 259 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 ZNF460Q14592 562 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 TCEA2Q15560 299 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 CSRP2Q16527 193 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 SLC30A9Q6PML9 568 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 TMEM207Q6UWW9 146 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 WASH2PQ6VEQ5 465 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 RAPH1Q70E73 1250 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 CPNE9Q8IYJ1 553 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 SLC22A15Q8IZD6 547 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 NKAPQ8N5F7 415 aaKnown RBP17.44■□□□□ 0.38
SDC2-205ENST00000520233 OR52A5Q9H2C5 316 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 DPEP2Q9H4A9 486 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 IL21RQ9HBE5 538 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 WASH6PQ9NQA3 447 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 TAAR2Q9P1P5 351 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 PCOLCE2Q9UKZ9 415 aa17.44■□□□□ 0.38
SDC2-205ENST00000520233 TP53BP1Q12888 1972 aaPredicted RBP17.43■□□□□ 0.38
SDC2-205ENST00000520233 LNP1A1A4G5 178 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 LMO7DNF2Z398 122 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 RGS16O15492 202 aaPredicted RBP17.43■□□□□ 0.38
SDC2-205ENST00000520233 MT-ND3P03897 115 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 MPOP05164 745 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 C2P06681 752 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 ENO3P13929 434 aaPredicted RBP17.43■□□□□ 0.38
SDC2-205ENST00000520233 PDHA2P29803 388 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 PREPP48147 710 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 RGS4P49798 205 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 ATXN3P54252 364 aaPredicted RBP17.43■□□□□ 0.38
SDC2-205ENST00000520233 IL2P60568 153 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 SF3A2Q15428 464 aaKnown RBP17.43■□□□□ 0.38
SDC2-205ENST00000520233 TAF1BQ53T94 588 aaPredicted RBP17.43■□□□□ 0.38
SDC2-205ENST00000520233 ACSBG2Q5FVE4 666 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 AGAP9Q5VTM2 703 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 LRRC8EQ6NSJ5 796 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 LVRNQ6Q4G3 990 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 ABRAXAS1Q6UWZ7 409 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 NEK10Q6ZWH5 1172 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 VRK3Q8IV63 474 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 MINDY1Q8N5J2 469 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 ACMSDQ8TDX5 336 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 SAP25Q8TEE9 199 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 EEF1AKMT1Q8WVE0 214 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 PGM2Q96G03 612 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 CABS1Q96KC9 395 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 ZNF446Q9NWS9 450 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 UCKL1Q9NWZ5 548 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 TBC1D29Q9UFV1 150 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 TLK1Q9UKI8 766 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 DOLKQ9UPQ8 538 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 ACOT9Q9Y305 439 aa17.43■□□□□ 0.38
SDC2-205ENST00000520233 SDK1Q7Z5N4 2213 aa17.42■□□□□ 0.38
SDC2-205ENST00000520233 A0A087X1B8 175 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms