RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SORCS3Q9UPU3 1222 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 MRPS17Q9Y2R5 130 aaKnown RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 OARD1Q9Y530 152 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3DA0A087WVF3 549 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3IA0A087WXS9 549 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3EA0A087X179 549 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3KA0A087X1G2 549 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3FA6NER0 549 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3LB9A6J9 549 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 SIX3O95343 332 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3HP0C7X1 549 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 ALOX15P16050 662 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 VCLP18206 1134 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TEAD1P28347 426 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 EEF1DP29692 281 aaKnown RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 HK3P52790 923 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 GALNT1Q10472 559 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 PPP1R3AQ16821 1122 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 MAP7D1Q3KQU3 841 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3GQ6DHY5 549 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3CQ6IPX1 549 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 NEK5Q6P3R8 708 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 CYHR1Q6ZMK1 362 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 Q6ZS52 159 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 NEK10Q6ZWH5 1172 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 FAM124AQ86V42 546 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TBC1D3Q8IZP1 549 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 KIRREL3Q8IZU9 778 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 PIAS4Q8N2W9 510 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 SYNPOQ8N3V7 929 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 GLMNQ92990 594 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 TMEM159Q96B96 161 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 COX14Q96I36 57 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 OSBPL6Q9BZF3 934 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 SHCBP1LQ9BZQ2 653 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 POLMQ9NP87 494 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-209ENST00000519141 ATXN10Q9UBB4 475 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 FAM8A1Q9UBU6 413 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 ADAMTS6Q9UKP5 1117 aa12.16□□□□□ -0.46
SPIDR-209ENST00000519141 USP34Q70CQ2 3546 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 PABPN1LA6NDY0 278 aaKnown RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 SLCO1B7G3V0H7 640 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 HGSO14964 777 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 FFAR2O15552 330 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 GPC4O75487 556 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 PAK4O96013 591 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 C8GP07360 202 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 RPS17P08708 135 aaKnown RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 GSTM1P09488 218 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 CHRNB1P11230 501 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 GABRG2P18507 467 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 PBLDP30039 288 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 HNRNPH2P55795 449 aaKnown RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 ZXDAP98168 799 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 CDK3Q00526 305 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 GSTM4Q03013 218 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 SP140Q13342 867 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 FGL2Q14314 439 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 ANKS6Q68DC2 871 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 DOK6Q6PKX4 331 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 RPS27LQ71UM5 84 aaKnown RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 YTHDF3Q7Z739 585 aaKnown RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 CUZD1Q86UP6 607 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 GBP7Q8N8V2 638 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 TP53I13Q8NBR0 393 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-209ENST00000519141 HMGB4Q8WW32 186 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 CCT6BQ92526 530 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 KLK6Q92876 244 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 LRRC37BQ96QE4 947 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 EGFL8Q99944 293 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 SLC17A9Q9BYT1 436 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 KDM4CQ9H3R0 1056 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 WDR26Q9H7D7 661 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 COG4Q9H9E3 785 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 DNAJC28Q9NX36 388 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 HEY2Q9UBP5 337 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 VTI1BQ9UEU0 232 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 FBXL21Q9UKT6 434 aa12.15□□□□□ -0.46
SPIDR-209ENST00000519141 TMEM202A6NGA9 273 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 LRRC14BA6NHZ5 514 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 HDAC3O15379 428 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 SLCO2B1O94956 709 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 ENO2P09104 434 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-209ENST00000519141 ZNF8P17098 575 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-209ENST00000519141 TARSP26639 723 aaKnown RBP12.14□□□□□ -0.47
SPIDR-209ENST00000519141 TPMTP51580 245 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 DGKEP52429 567 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 PHKG1Q16816 387 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 CRTC3Q6UUV7 619 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 UBE2R2Q712K3 238 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-209ENST00000519141 VRK3Q8IV63 474 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 PDPRQ8NCN5 879 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 FLCNQ8NFG4 579 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 ERP27Q96DN0 273 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 SHDQ96IW2 340 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 RILPQ96NA2 401 aa12.14□□□□□ -0.47
SPIDR-209ENST00000519141 C1QTNF3Q9BXJ4 246 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms