RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 RBMXL3Q8N7X1 1067 aaKnown RBP3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 MIGA1Q8NAN2 632 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 SPC24Q8NBT2 197 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 CLEC18CQ8NCF0 446 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 OR7G3Q8NG95 312 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 OR8H1Q8NGG4 311 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 UTP15Q8TED0 518 aaKnown RBP3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 DENND1AQ8TEH3 1009 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 PPP4R1Q8TF05 950 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 FAM216AQ8WUB2 273 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 SMPDL3BQ92485 455 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 RAD54LQ92698 747 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 TEKT1Q969V4 418 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 MIB2Q96AX9 1013 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 SNRNP40Q96DI7 357 aaKnown RBP3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 PDLIM5Q96HC4 596 aaKnown RBP3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 CDHR1Q96JP9 859 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 NLRP4Q96MN2 994 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 ZNF558Q96NG5 402 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 CPNE1Q99829 537 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 SEMA3CQ99985 751 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 FOXP1Q9H334 677 aaPredicted RBP3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 RHCGQ9UBD6 479 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 B3GALT5Q9Y2C3 310 aa3.23□□□□□ -1.89
RNU6-840P-201ENST00000517275 LRRD1A4D1F6 860 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 LILRA5A6NI73 299 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 YDJCA8MPS7 323 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 BECN2A8MW95 431 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 PRR32B1ATL7 298 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 H0YGN5 161 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SLC33A1O00400 549 aaPredicted RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 PLK4O00444 970 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SLC16A5O15375 505 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 KINO60870 393 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 DIAPH2O60879 1101 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 WISP2O76076 250 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 NUDT3O95989 172 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 PNPP00491 289 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CSN3P07498 182 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 VIMP08670 466 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CYP19A1P11511 503 aaPredicted RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 PDGFRAP16234 1089 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 EPCAMP16422 314 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 STMN1P16949 149 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 GNAZP19086 355 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 S1PR1P21453 382 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 FBLP22087 321 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 HOXD3P31249 432 aaPredicted RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 FRKP42685 505 aaPredicted RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SLC9A3P48764 834 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CLK1P49759 484 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CLDN15P56746 228 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 STX1BP61266 288 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 MAT1AQ00266 395 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 EZH2Q15910 746 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SETMARQ53H47 684 aaPredicted RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SHC4Q6S5L8 630 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CCNI2Q6ZMN8 369 aaPredicted RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 MEPCEQ7L2J0 689 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CTU1Q7Z7A3 348 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SRRM1Q8IYB3 904 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 C1orf87Q8N0U7 546 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 NDUFAF2Q8N183 169 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 OR2AJ1Q8NGZ0 328 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 OR14A16Q8NHC5 309 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SPATA22Q8NHS9 363 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 EXOC4Q96A65 974 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CENPTQ96BT3 561 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 HES6Q96HZ4 224 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CABS1Q96KC9 395 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 FAM84BQ96KN1 310 aaPredicted RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 PRMT6Q96LA8 375 aaPredicted RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 CCDC43Q96MW1 224 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SLC25A33Q9BSK2 321 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 LMF2Q9BU23 707 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 DCLK3Q9C098 648 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 SLA2Q9H6Q3 261 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 MID1IP1Q9NPA3 183 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 TMEM30AQ9NV96 361 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 DNAJC17Q9NVM6 304 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 TRNAU1APQ9NX07 287 aaKnown RBP3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 KCNK7Q9Y2U2 307 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 AMDHD2Q9Y303 409 aa3.22□□□□□ -1.89
RNU6-840P-201ENST00000517275 PRSS51A0A1B0GVH4 220 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 RPS10-NUDT3A0A1W2PQS6 291 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 FAM90A10PA6NDY2 464 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 NEMP2A6NFY4 417 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 C15orf62A8K5M9 175 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 PROB1E7EW31 1015 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 ZNF263O14978 683 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 ZBTB43O43298 467 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 XRCC3O43542 346 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 GPR137BO60478 399 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 WDPCPO95876 746 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 OLFM2O95897 454 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 IGHV2-70P01814 119 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 MT-ND3P03897 115 aa3.21□□□□□ -1.9
RNU6-840P-201ENST00000517275 SLPIP03973 132 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms