RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 TCEAL2Q9H3H9 227 aaPredicted RBP5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CENPHQ9H3R5 247 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 RHOJQ9H4E5 214 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SYNDIG1Q9H7V2 258 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 COG4Q9H9E3 785 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 IL21RQ9HBE5 538 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PRM3Q9NNZ6 103 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PARD6AQ9NPB6 346 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GPR27Q9NS67 375 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 IMP3Q9NV31 184 aaKnown RBP5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 DNAAF2Q9NVR5 837 aaKnown RBP5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KLHL42Q9P2K6 505 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PSMC3IPQ9P2W1 217 aaPredicted RBP5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 POLG2Q9UHN1 485 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SLC24A2Q9UI40 661 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 RABGEF1Q9UJ41 708 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TSR3Q9UJK0 312 aaKnown RBP5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TMPRSS11EQ9UL52 423 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PADI4Q9UM07 663 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PSMD13Q9UNM6 376 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ASF1AQ9Y294 204 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PLEKHM1Q9Y4G2 1056 aa5.35□□□□□ -1.55
SCARNA16.4-201ENST00000516956 A0A087X1B8 175 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ZNF839A8K0R7 811 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 IQCF5A8MTL0 148 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 EIF3FO00303 357 aaPredicted RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 RASGRF2O14827 1237 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TP73O15350 636 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ZBTB14O43829 449 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SH3BP5O60239 455 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SYF2O95926 243 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 MT-ND3P03897 115 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CATP04040 527 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 MPOP05164 745 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SNRPAP09012 282 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 F3P13726 295 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 AMD1P17707 334 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CYP2A7P20853 494 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ARNTP27540 789 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ECHS1P30084 290 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CCR7P32248 378 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 HSD17B3P37058 310 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CCNFP41002 786 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ABCG1P45844 678 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PREPP48147 710 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SERPINB8P50452 374 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 LIMK2P53671 638 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 B4GALNT1Q00973 533 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 DMPKQ09013 629 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PRKAA1Q13131 559 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 NFE2L1Q14494 772 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 FAM83EQ2M2I3 478 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KRT71Q3SY84 523 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KHDC1Q4VXA5 237 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 C14orf28Q4W4Y0 310 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 C6orf132Q5T0Z8 1188 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 MROH9Q5TGP6 573 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 AGAP9Q5VTM2 703 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 METRNLQ641Q3 311 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 WASH2PQ6VEQ5 465 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CCDC91Q7Z6B0 441 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ZC3HC1Q86WB0 502 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 RBM12BQ8IXT5 1001 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 RIBC1Q8N443 379 aaPredicted RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ARL10Q8N8L6 244 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SIDT2Q8NBJ9 832 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PHC3Q8NDX5 983 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 OR4C6Q8NH72 309 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 OR10G6Q8NH81 332 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CCL4L1Q8NHW4 92 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 MCOLN3Q8TDD5 553 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 AENQ8WTP8 325 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 NAT14Q8WUY8 206 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TFGQ92734 400 aaPredicted RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 LINGO1Q96FE5 620 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SCYL1Q96KG9 808 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PHOX2BQ99453 314 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GPR21Q99679 349 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ROPN1BQ9BZX4 212 aaPredicted RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 IQCGQ9H095 443 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 P2RY12Q9H244 342 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 VPS11Q9H270 941 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 MVB12BQ9H7P6 319 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ROPN1Q9HAT0 212 aaPredicted RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 POPDC3Q9HBV1 291 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GPAMQ9HCL2 828 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 WASH6PQ9NQA3 447 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PRDM8Q9NQV8 689 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 UCKL1Q9NWZ5 548 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 AKAP7Q9P0M2 348 aaPredicted RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 LRIT1Q9P2V4 623 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CTNNAL1Q9UBT7 734 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TBC1D29Q9UFV1 150 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SLC23A2Q9UGH3 650 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TBK1Q9UHD2 729 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KLF15Q9UIH9 416 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 LNPEPQ9UIQ6 1025 aa5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 APOBEC2Q9Y235 224 aaKnown RBP5.34□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TDRKHQ9Y2W6 561 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms