RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 PRPH2P23942 346 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HSD3B2P26439 372 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OXTRP30559 389 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DNAJA1P31689 397 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 EPHX2P34913 555 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MSX2P35548 267 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CHRNA4P43681 627 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CCR10P46092 362 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GNPDA1P46926 289 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRPC1P48995 793 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ALDH9A1P49189 494 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CCR3P51677 355 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PLA2G16P53816 162 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CDH13P55290 713 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 AP1S2P56377 157 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 AP1S1P61966 158 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NKX3-2P78367 333 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PPP2R2BQ00005 443 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF45Q02386 682 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DSC2Q02487 901 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GNA12Q03113 381 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RELAQ04206 551 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SRSF11Q05519 484 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SLC10A7Q0GE19 358 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ELP6Q0PNE2 266 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FADDQ13158 208 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF177Q13360 481 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PMS2P3Q13401 168 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OLIG2Q13516 323 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GTF2H2Q13888 395 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 KCNC3Q14003 757 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CAPRIN1Q14444 709 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR4D1Q15615 310 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TSNQ15631 228 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SMAD1Q15797 465 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TBCEQ15813 527 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DDR2Q16832 855 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PTPRNQ16849 979 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF181Q2M3W8 571 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 C5orf22Q49AR2 442 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GPR33Q49SQ1 333 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TIGD5Q53EQ6 642 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TOR1AIP1Q5JTV8 583 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 C6orf136Q5SQH8 315 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 C10orf120Q5SQS8 335 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 C6orf141Q5SZD1 244 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OTUD3Q5T2D3 398 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GJC2Q5T442 439 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PIK3R6Q5UE93 754 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF691Q5VV52 312 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MFSD14CQ5VZR4 134 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 IL31Q6EBC2 164 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PTRHD1Q6GMV3 140 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CAPN13Q6MZZ7 669 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ANKRD26P1Q6NSI1 321 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GTF2H2CQ6P1K8 395 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GALNT18Q6P9A2 607 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CYP20A1Q6UW02 462 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 IL27RAQ6UWB1 636 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ATG14Q6ZNE5 492 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NCCRP1Q6ZVX7 275 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 USP43Q70EL4 1123 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRIM46Q7Z4K8 759 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NECAB2Q7Z6G3 386 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MILR1Q7Z6M3 343 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PIM3Q86V86 326 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SERINC5Q86VE9 423 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RETREG3Q86VR2 466 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TSPYL5Q86VY4 417 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 IFNEQ86WN2 208 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HORMAD1Q86X24 394 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 KRT73Q86Y46 540 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PLD3Q8IV08 490 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LACC1Q8IV20 430 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 P3H2Q8IVL5 708 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZC3H7AQ8IWR0 971 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SCN4BQ8IWT1 228 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RIMKLAQ8IXN7 391 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 KIAA2013Q8IYS2 634 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MICU2Q8IYU8 434 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ABI1Q8IZP0 508 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OFCC1Q8IZS5 231 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LGI2Q8N0V4 545 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DEPDC4Q8N2C3 294 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CENPSQ8N2Z9 138 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PGBD3Q8N328 593 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SPATA6LQ8N4H0 392 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PAF1Q8N7H5 531 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF557Q8N988 423 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PCSK9Q8NBP7 692 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF548Q8NEK5 533 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ACVR1CQ8NER5 493 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 C9orf43Q8TAL5 461 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ARRDC2Q8TBH0 407 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 METTL6Q8TCB7 284 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PROKR1Q8TCW9 393 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CHTF18Q8WVB6 975 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ANKRD49Q8WVL7 239 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TMEM40Q8WWA1 233 aa3.32□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FIG4Q92562 907 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms