RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 CFC1P0CG37 223 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 VPREB1P12018 145 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 PRLRP16471 622 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 SAT1P21673 171 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 ARSEP51690 589 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 SNX16P57768 344 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 MFAP5Q13361 173 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 CEP85LQ5SZL2 805 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 RBMS3Q6XE24 437 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 DENND5BQ6ZUT9 1274 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 L3MBTL4Q8NA19 623 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 POC5Q8NA72 575 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 ZBTB8BQ8NAP8 495 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 MCUQ8NE86 351 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 ZNF501Q96CX3 271 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 ZNF582Q96NG8 517 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 SLC22A12Q96S37 553 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 SCRT2Q9NQ03 307 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 MBNL1Q9NR56 388 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 OLFML3Q9NRN5 406 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 ADPRHL2Q9NX46 363 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 DDX43Q9NXZ2 648 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 ZNF624Q9P2J8 865 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 ADD3Q9UEY8 706 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 HACL1Q9UJ83 578 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 PLAGL1Q9UM63 463 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 C2CD2Q9Y426 696 aa4.46□□□□□ -1.7
SMARCA5-203ENST00000515531 LNP1A1A4G5 178 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 GAS8-AS1O95177 125 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 CSH1P0DML2 217 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 CSH2P0DML3 217 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 CBLP22681 906 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 CHRNB4P30926 498 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 PNLIPRP2P54317 469 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 PRKAA1Q13131 559 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 CUL4AQ13619 759 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 CCDC6Q16204 474 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 MEA1Q16626 185 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 MRGPRG-AS1Q2M3A8 158 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 ZNF876PQ49A33 203 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 ZC2HC1CQ53FD0 456 aaPredicted RBP4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 MZT2BQ6NZ67 158 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 TMCO3Q6UWJ1 677 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 OR2T12Q8NG77 320 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 FAM76AQ8TAV0 307 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 FCAMRQ8WWV6 532 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 DAZLQ92904 295 aaKnown RBP4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 JAKMIP2Q96AA8 810 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 CALML4Q96GE6 196 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 RHNO1Q9BSD3 238 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 KIFC3Q9BVG8 833 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 KCNK15Q9H427 330 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 SLA2Q9H6Q3 261 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 ZNF696Q9H7X3 374 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 PSD3Q9NYI0 1048 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 NPAP1Q9NZP6 1156 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 LARSQ9P2J5 1176 aaKnown RBP4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 TBC1D29Q9UFV1 150 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 ACAD8Q9UKU7 415 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 GPR34Q9UPC5 381 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 FLT1P17948 1338 aa4.45□□□□□ -1.7
SMARCA5-203ENST00000515531 hCG_1807616A0A1W2PRN6 198 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 OR2A25A4D2G3 310 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 EDIL3O43854 480 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 SSX4O60224 188 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 AVILO75366 819 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 ZWINTO95229 277 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 IGHV4-38-2P0DP08 117 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 GJA1P17302 382 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 NRIP1P48552 1158 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 CXCL9Q07325 125 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 EPS8Q12929 822 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 MELKQ14680 651 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 IGSF11Q5DX21 431 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 HAUS6Q7Z4H7 955 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 AACSQ86V21 672 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 CRYBG2Q8N1P7 616 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 PPFIBP2Q8ND30 876 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 NSUN4Q96CB9 384 aaKnown RBP4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 ERLEC1Q96DZ1 483 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 PAFAH2Q99487 392 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 TEX12Q9BXU0 123 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 BARHL1Q9BZE3 327 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 SPATC1LQ9H0A9 340 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 INTS10Q9NVR2 710 aaKnown RBP4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 SLC7A7Q9UM01 511 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 ZNF148Q9UQR1 794 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 TMEM5Q9Y2B1 443 aa4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.44□□□□□ -1.72e-11■■□□□ 11.5
SMARCA5-203ENST00000515531 SPIN1Q9Y657 262 aaPredicted RBP4.44□□□□□ -1.7
SMARCA5-203ENST00000515531 LOC100509620A0A075B734 347 aa4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 PRSS51A0A1B0GVH4 220 aa4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 OR6C76A6NM76 312 aa4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 PLOD2O00469 737 aa4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 TO15178 435 aa4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 PAK4O96013 591 aaPredicted RBP4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 TSHBP01222 138 aa4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 CASP2P42575 452 aa4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 MATR3P43243 847 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMARCA5-203ENST00000515531 THOP1P52888 689 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms