RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CACHD1Q5VU97 1274 aa23.94■■□□□ 1.42
SNF8-213ENST00000514929 LILRA3Q8N6C8 439 aaPredicted RBP23.94■■□□□ 1.42
SNF8-213ENST00000514929 ZSCAN1Q8NBB4 408 aa23.94■■□□□ 1.42
SNF8-213ENST00000514929 TLR10Q9BXR5 811 aa23.94■■□□□ 1.42
SNF8-213ENST00000514929 RAB33BQ9H082 229 aa23.94■■□□□ 1.42
SNF8-213ENST00000514929 SIDT1Q9NXL6 827 aaKnown RBP23.94■■□□□ 1.42
SNF8-213ENST00000514929 C17orf113A0A1B0GUU1 675 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 HEATR9A2RTY3 570 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 KIF1CO43896 1103 aaKnown RBP23.93■■□□□ 1.42
SNF8-213ENST00000514929 CEP104O60308 925 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 RAD1O60671 282 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 APRTP07741 180 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 ZSCAN5DPP0CG00 497 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 GRIA1P42261 906 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 PCSK4Q6UW60 755 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 XKR5Q6UX68 686 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 PRSS42Q7Z5A4 293 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 PIANPQ8IYJ0 282 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 CACNA2D3Q8IZS8 1091 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 CLDN19Q8N6F1 224 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 GLIS1Q8NBF1 620 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 RMDN2Q96LZ7 410 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 ZNF768Q9H5H4 540 aaKnown RBP23.93■■□□□ 1.42
SNF8-213ENST00000514929 SMARCAL1Q9NZC9 954 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 ZKSCAN5Q9Y2L8 839 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 COLEC10Q9Y6Z7 277 aa23.93■■□□□ 1.42
SNF8-213ENST00000514929 PRB1P04280 392 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 PSMA3P25788 255 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 RPL22P35268 128 aaKnown RBP23.92■■□□□ 1.42
SNF8-213ENST00000514929 DBN1Q16643 649 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 CAPRIN2Q6IMN6 1127 aaKnown RBP23.92■■□□□ 1.42
SNF8-213ENST00000514929 ZNF449Q6P9G9 518 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 DRICH1Q6PGQ1 229 aaPredicted RBP23.92■■□□□ 1.42
SNF8-213ENST00000514929 GSTA5Q7RTV2 222 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 ZFPM2Q8WW38 1151 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 TTC9Q92623 222 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 WBP1Q96G27 269 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 COG4Q9H9E3 785 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 PILRAQ9UKJ1 303 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 DRG1Q9Y295 367 aaKnown RBP23.92■■□□□ 1.42
SNF8-213ENST00000514929 PCDHGA4Q9Y5G9 962 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 HEBP2Q9Y5Z4 205 aa23.92■■□□□ 1.42
SNF8-213ENST00000514929 CCDC162PA2VCL2 907 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 OR51F1A6NGY5 319 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 ADRA1DP25100 572 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 CXCR5P32302 372 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 PPP1CAP62136 330 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 COL9A2Q14055 689 aaPredicted RBP23.91■■□□□ 1.42
SNF8-213ENST00000514929 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.91■■□□□ 1.42
SNF8-213ENST00000514929 RANBP9Q96S59 729 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 KIR3DX1Q9H7L2 352 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 CASS4Q9NQ75 786 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 SLC24A2Q9UI40 661 aa23.91■■□□□ 1.42
SNF8-213ENST00000514929 STK17BO94768 372 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 AP2A2O94973 939 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 WT1P19544 449 aaPredicted RBP23.9■■□□□ 1.42
SNF8-213ENST00000514929 NDUFS1P28331 727 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 NSG1P42857 185 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 SH3BP2P78314 561 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 ITIH4Q14624 930 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 TSTD2Q5T7W7 516 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 C4orf22Q6V702 233 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 OOSP2Q86WS3 158 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 NLGN4XQ8N0W4 816 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 NLGN4YQ8NFZ3 816 aaPredicted RBP23.9■■□□□ 1.42
SNF8-213ENST00000514929 OR13J1Q8NGT2 312 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 KLHL6Q8WZ60 621 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 HDAC10Q969S8 669 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 OR6C1Q96RD1 312 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 HRASLS2Q9NWW9 162 aa23.9■■□□□ 1.42
SNF8-213ENST00000514929 SMG1Q96Q15 3661 aaKnown RBP23.9■■□□□ 1.42
SNF8-213ENST00000514929 OR5K3A6NET4 321 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 IFRD1O00458 451 aaPredicted RBP23.89■■□□□ 1.41
SNF8-213ENST00000514929 GSTM1P09488 218 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 MAP4P27816 1152 aaKnown RBP23.89■■□□□ 1.41
SNF8-213ENST00000514929 FOXN2P32314 431 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 GSTM4Q03013 218 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 DNTTIP2Q5QJE6 756 aaKnown RBP23.89■■□□□ 1.41
SNF8-213ENST00000514929 ARMC6Q6NXE6 501 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 AFTPHQ6ULP2 937 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 NLRP9Q7RTR0 991 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 PPHLN1Q8NEY8 458 aaKnown RBP23.89■■□□□ 1.41
SNF8-213ENST00000514929 UBXN4Q92575 508 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 FERD3LQ96RJ6 166 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 TTC1Q99614 292 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 SPRY4Q9C004 299 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 HOMER3Q9NSC5 361 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 SLC2A6Q9UGQ3 507 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 RIMKLBQ9ULI2 386 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 TMEM184BQ9Y519 407 aaPredicted RBP23.89■■□□□ 1.41
SNF8-213ENST00000514929 ATMQ13315 3056 aa23.89■■□□□ 1.41
SNF8-213ENST00000514929 QSOX1O00391 747 aa23.88■■□□□ 1.41
SNF8-213ENST00000514929 LIFP15018 202 aa23.88■■□□□ 1.41
SNF8-213ENST00000514929 NELFEP18615 380 aaKnown RBP23.88■■□□□ 1.41
SNF8-213ENST00000514929 KCNJ1P48048 391 aa23.88■■□□□ 1.41
SNF8-213ENST00000514929 BASP1P80723 227 aaKnown RBP23.88■■□□□ 1.41
SNF8-213ENST00000514929 RPA4Q13156 261 aa23.88■■□□□ 1.41
SNF8-213ENST00000514929 IL11RAQ14626 422 aa23.88■■□□□ 1.41
SNF8-213ENST00000514929 OR6P1Q8NGX9 317 aa23.88■■□□□ 1.41
SNF8-213ENST00000514929 ZNF778Q96MU6 729 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms