RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 NODALQ96S42 347 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 RIMS4Q9H426 269 aaPredicted RBP16.05■□□□□ 0.16
CDH6-205ENST00000514738 SLC22A11Q9NSA0 550 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 TBC1D13Q9NVG8 400 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 ERVK13-1Q9NX77 482 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 GCNT4Q9P109 453 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 SHOC2Q9UQ13 582 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDH6-205ENST00000514738 PEX16Q9Y5Y5 336 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 TEX13CA0A0J9YWL9 993 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 HMX2A2RU54 273 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 DFFAO00273 331 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 TO15178 435 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 IFNA7P01567 189 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 ERVK-10P10266 1014 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 ACADLP28330 430 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 CAP2P40123 477 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 NUMBP49757 651 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 IRF3Q14653 427 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 MSS51Q4VC12 460 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 TBCELQ5QJ74 424 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 OTOP1Q7RTM1 612 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 RHPN2Q8IUC4 686 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 KRT78Q8N1N4 520 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 RORBQ92753 470 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 AP2M1Q96CW1 435 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 CENPNQ96H22 339 aaPredicted RBP16.05■□□□□ 0.16
CDH6-205ENST00000514738 FRMD6Q96NE9 622 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 TRNT1Q96Q11 434 aaKnown RBP16.05■□□□□ 0.16
CDH6-205ENST00000514738 REG4Q9BYZ8 158 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 CCDC90BQ9GZT6 254 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 SDHAF2Q9NX18 166 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 UBQLN2Q9UHD9 624 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 LRP6O75581 1613 aa16.05■□□□□ 0.16
CDH6-205ENST00000514738 RIMS1Q86UR5 1692 aaKnown RBP16.04■□□□□ 0.16
CDH6-205ENST00000514738 POM121BA6NF01 834 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 BEST1O76090 585 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 ETS1P14921 441 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 FASP25445 335 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 NSFP46459 744 aaKnown RBP16.04■□□□□ 0.16
CDH6-205ENST00000514738 PSMD8P48556 350 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 PRELPP51888 382 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 TSPAN5P62079 268 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 EXOSC2Q13868 293 aaKnown RBP16.04■□□□□ 0.16
CDH6-205ENST00000514738 BAK1Q16611 211 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 SLC9B1Q4ZJI4 515 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 SPANXN2Q5MJ10 180 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 PDZK1Q5T2W1 519 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 THAP5Q7Z6K1 395 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 CCDC24Q8N4L8 307 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 AKR7LQ8NHP1 331 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 AGR3Q8TD06 166 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 QRFPRQ96P65 431 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 WDR83Q9BRX9 315 aaKnown RBP16.04■□□□□ 0.16
CDH6-205ENST00000514738 UPF3AQ9H1J1 476 aaKnown RBP16.04■□□□□ 0.16
CDH6-205ENST00000514738 MRPL47Q9HD33 250 aaKnown RBP16.04■□□□□ 0.16
CDH6-205ENST00000514738 KCNH4Q9UQ05 1017 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 AURKCQ9UQB9 309 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 A3GALT2U3KPV4 340 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 GPR171O14626 319 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 H2AFB1P0C5Y9 115 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 H2AFB2P0C5Z0 115 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 ACVR2AP27037 513 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 PPP3CCP48454 512 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 SERPINB9P50453 376 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 EMX1Q04741 257 aaPredicted RBP16.04■□□□□ 0.16
CDH6-205ENST00000514738 EMC2Q15006 297 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 ATRAIDQ6UW56 229 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 EPGNQ6UW88 154 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 DPPA2Q7Z7J5 298 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 NLRP8Q86W28 1048 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 SLC43A2Q8N370 569 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 OR1M1Q8NGA1 313 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 ZNF564Q8TBZ8 553 aaPredicted RBP16.04■□□□□ 0.16
CDH6-205ENST00000514738 TUBGCP3Q96CW5 907 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 REPS1Q96D71 796 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 CPXM1Q96SM3 734 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 PFDN5Q99471 154 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 TTLL2Q9BWV7 592 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 AP5M1Q9H0R1 490 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 HEXA-AS1Q9H8Q6 139 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 RAPGEFL1Q9UHV5 662 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 LAMB2P55268 1798 aa16.04■□□□□ 0.16
CDH6-205ENST00000514738 TRIM3O75382 744 aaPredicted RBP16.03■□□□□ 0.16
CDH6-205ENST00000514738 TADA2AO75478 443 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 FAM155BO75949 473 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 TPOP07202 933 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 FGF3P11487 239 aaPredicted RBP16.03■□□□□ 0.16
CDH6-205ENST00000514738 PSME3P61289 254 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 CSTF1Q05048 431 aaKnown RBP16.03■□□□□ 0.16
CDH6-205ENST00000514738 EPS8Q12929 822 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 KLF1Q13351 362 aaPredicted RBP16.03■□□□□ 0.16
CDH6-205ENST00000514738 TEAD4Q15561 434 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 FNBP1LQ5T0N5 605 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 XRRA1Q6P2D8 792 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
CDH6-205ENST00000514738 APBA2Q99767 749 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 SPHK1Q9NYA1 384 aa16.03■□□□□ 0.16
CDH6-205ENST00000514738 VSX1Q9NZR4 365 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms