RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 GLDCP23378 1020 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 GTF2E2P29084 291 aaKnown RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ECHS1P30084 290 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RPL3P39023 403 aaKnown RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MAGEA11P43364 429 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 COPZ1P61923 177 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 HERVK_113P63132 956 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 SKP1P63208 163 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 SLC18A2Q05940 514 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 COL9A2Q14055 689 aaPredicted RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MYLK3Q32MK0 819 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ACSBG2Q5FVE4 666 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 PIK3R6Q5UE93 754 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 LRRC66Q68CR7 880 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MED27Q6P2C8 311 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ABRAXAS1Q6UWZ7 409 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 TAF8Q7Z7C8 310 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ZCCHC7Q8N3Z6 543 aaKnown RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 KCNA7Q96RP8 456 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ERVK-6Q9BXR3 956 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 OSBPL6Q9BZF3 934 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 EPB41L4BQ9H329 900 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 EPS8L2Q9H6S3 715 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 AKTIPQ9H8T0 292 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 PNPLA8Q9NP80 782 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 KLHL1Q9NR64 748 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RAPGEFL1Q9UHV5 662 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ATP6V1HQ9UI12 483 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MAGEL2Q9UJ55 1249 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 PPM1HQ9ULR3 514 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ERVW-1Q9UQF0 538 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 FADS3Q9Y5Q0 445 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ZNF780BQ9Y6R6 833 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MYH8P13535 1937 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MYL12BO14950 172 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 DCLK1O15075 740 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ARHGEF9O43307 516 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 OR1I1O60431 355 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MMP20O60882 483 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RFPL1O75677 317 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ADH5P11766 374 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MYL12AP19105 171 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RPL10P27635 214 aaKnown RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MTHFRP42898 656 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 DGKQP52824 942 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 GSTA3Q16772 222 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 Q6ZVL8 140 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 TRIM74Q86UV6 250 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 CBR4Q8N4T8 237 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 SVOPQ8N4V2 548 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 AADATQ8N5Z0 425 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 C3orf58Q8NDZ4 430 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ZCCHC10Q8TBK6 192 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 LCN9Q8WX39 176 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 LMLNQ96KR4 655 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 C12orf66Q96MD2 445 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 SEZ6LQ9BYH1 1024 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 FBRSL1Q9HCM7 1045 aaKnown RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 C1orf109Q9NX04 203 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MAT2BQ9NZL9 334 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RGS17Q9UGC6 210 aaPredicted RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 SLC7A8Q9UHI5 535 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RPL26L1Q9UNX3 145 aaKnown RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RWDD3Q9Y3V2 267 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 LAMB4A4D0S4 1761 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ELOVL7A1L3X0 281 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 G3V2T6 193 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 K7EPI3 171 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 K7ERQ8 282 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 HAS3O00219 553 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 KDELR3O43731 214 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RFPL2O75678 378 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 CCDC159P0C7I6 412 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 FSHRP23945 695 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 IVDP26440 423 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 GUCA1AP43080 201 aaPredicted RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ST13P50502 369 aaKnown RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MAPK12P53778 367 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 HSPB3Q12988 150 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 GRM2Q14416 872 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ANGPT1Q15389 498 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ZNHIT3Q15649 155 aaPredicted RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 BHLHB9Q6PI77 547 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 CYP2U1Q7Z449 544 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 CILP2Q8IUL8 1156 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 FAM20CQ8IXL6 584 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 SFRP1Q8N474 314 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 SCAMP4Q969E2 229 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RELTQ969Z4 430 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 RNFT2Q96EX2 444 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 ZIC5Q96T25 663 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 FNDC11Q9BVV2 318 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 KIFC1Q9BW19 673 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 CXCL16Q9H2A7 254 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 NSUN3Q9H649 340 aaKnown RBP6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 TLR9Q9NR96 1032 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MAPRE3Q9UPY8 281 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 SLC22A14Q9Y267 594 aa6.08□□□□□ -1.44
ATP2C1-222ENST00000514654 MBLAC1A4D2B0 266 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms