RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 B8ZZF3 427 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 PSMD3O43242 534 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 LIASO43766 372 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 SLC35G4P0C7Q5 338 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 FAM87AP0C7U9 286 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 FGF5P12034 268 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF28P17035 718 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 CDKN1CP49918 316 aaPredicted RBP10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 SEPT6Q14141 434 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 POU6F1Q14863 301 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 SEL1L2Q5TEA6 688 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 CAPRIN2Q6IMN6 1127 aaKnown RBP10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 CYB5D1Q6P9G0 228 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 MICALCLQ6ZW33 695 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 ESX1Q8N693 406 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 UBE2Q2Q8WVN8 375 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 UBXN4Q92575 508 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 KIAA1143Q96AT1 154 aaPredicted RBP10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 OR6C1Q96RD1 312 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 CD180Q99467 661 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 ARHGAP9Q9BRR9 750 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 CCM2Q9BSQ5 444 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 EFHD1Q9BUP0 239 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 FRMD8P1Q9BZ68 369 aaPredicted RBP10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 ULBP3Q9BZM4 244 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 COG4Q9H9E3 785 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 GPN2Q9H9Y4 310 aaPredicted RBP10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 STARD5Q9NSY2 213 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 ZDHHC3Q9NYG2 299 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 FAM8A1Q9UBU6 413 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 SLC24A2Q9UI40 661 aa10.21□□□□□ -0.77
HMGXB3-205ENST00000514469 HELZ2Q9BYK8 2649 aaKnown RBP10.21□□□□□ -0.78
HMGXB3-205ENST00000514469 PIEZO2Q9H5I5 2752 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 ERI2A8K979 691 aaKnown RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 TERTO14746 1132 aaKnown RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 KRT86O43790 486 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 PRSS56P0CW18 603 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 TPH1P17752 444 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 ITGB6P18564 788 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 STIP1P31948 543 aaKnown RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 GSDMDP57764 484 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 CACNG1Q06432 222 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 CDC20Q12834 499 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 TUBB3Q13509 450 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 DBN1Q16643 649 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 CRTC2Q53ET0 693 aaPredicted RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 ZRANB3Q5FWF4 1079 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 DNTTIP2Q5QJE6 756 aaKnown RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 BORAQ6PGQ7 559 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 C6orf15Q6UXA7 325 aaPredicted RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 LINC00523Q86TU6 105 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 SERPINA9Q86WD7 417 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 OOSP2Q86WS3 158 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 KMT5CQ86Y97 462 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 SLC13A5Q86YT5 568 aaPredicted RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 PIANPQ8IYJ0 282 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 UNC5BQ8IZJ1 945 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 CARFQ8N187 725 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 STYXQ8WUJ0 223 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 STARD8Q92502 1023 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 CDKN2AIPNLQ96HQ2 116 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 CATSPER2Q96P56 530 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 SPENQ96T58 3664 aaKnown RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 MAP3K3Q99759 626 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 OR52A5Q9H2C5 316 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 VPS37BQ9H9H4 285 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 PIH1D1Q9NWS0 290 aaKnown RBP10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 IL17BQ9UHF5 180 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 GUCA1BQ9UMX6 200 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 HEBP2Q9Y5Z4 205 aa10.2□□□□□ -0.78
HMGXB3-205ENST00000514469 AHCTF1Q8WYP5 2266 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 ARHGAP6O43182 974 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 SPAG6O75602 509 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 KIAA0754O94854 1291 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 SUN1O94901 812 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 AP2A2O94973 939 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 TIAF1O95411 115 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 GSTM1P09488 218 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 SFTPCP11686 197 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 FOLR1P15328 257 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 NDUFS1P28331 727 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 FOXN2P32314 431 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 FDFT1P37268 417 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 KPNA2P52292 529 aaKnown RBP10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 GSTM4Q03013 218 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 CDH17Q12864 832 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 NFATC3Q12968 1075 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 RPA4Q13156 261 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 KCNAB1Q14722 419 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 MEI1Q5TIA1 1274 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 PACS1Q6VY07 963 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 CERS6Q6ZMG9 384 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 PPP1R3BQ86XI6 285 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 RASGRP3Q8IV61 690 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 CFAP206Q8IYR0 622 aa10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 TAB3Q8N5C8 712 aaPredicted RBP10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 SIDT2Q8NBJ9 832 aaKnown RBP10.19□□□□□ -0.78
HMGXB3-205ENST00000514469 GALNT6Q8NCL4 622 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms