RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 CD180Q99467 661 aa13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 FSD1LQ9BXM9 530 aa13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 GPR87Q9BY21 358 aa13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 TRIM55Q9BYV6 548 aa13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 ASB8Q9H765 288 aa13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 SLC24A2Q9UI40 661 aa13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 FARSAQ9Y285 508 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-217ENST00000513438 BLACEA4D250 179 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 ANXA9O76027 345 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 SRP72O76094 671 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 PRAMEF1O95521 474 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 PDGFAP04085 211 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 PTPN4P29074 926 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 ARCN1P48444 511 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 TUBB4BP68371 445 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 XIAPP98170 497 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 PDE1BQ01064 536 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 OLIG2Q13516 323 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 TUBB2AQ13885 445 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 TAF1AQ15573 450 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 GPR19Q15760 415 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 UGT8Q16880 541 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 TMTC4Q5T4D3 741 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 ARMC6Q6NXE6 501 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 CLEC18BQ6UXF7 455 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 RANBP10Q6VN20 620 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 BBS12Q6ZW61 710 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 TMEM126BQ8IUX1 230 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 CFAP206Q8IYR0 622 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 OR4E2Q8NGC2 313 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 MR1Q95460 341 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 ZNF501Q96CX3 271 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 PPM1MQ96MI6 270 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 APOL2Q9BQE5 337 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 GORASP1Q9BQQ3 440 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 TUBB2BQ9BVA1 445 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 GBA3Q9H227 469 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 FKBPLQ9UIM3 349 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 TFR2Q9UP52 801 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 COLEC10Q9Y6Z7 277 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 RELNP78509 3460 aa13.05□□□□□ -0.32
POLR2J3-217ENST00000513438 LRRK2Q5S007 2527 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 C5orf60A6NFR6 353 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 APOC4-APOC2K7ER74 178 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 DDX3YO15523 660 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 SGTAO43765 313 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 SCRG1O75711 98 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 ZBTB11O95625 1053 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 APOC2P02655 101 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 POLR2CP19387 275 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 PTMSP20962 102 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 ADRA1AP35348 466 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 CD97P48960 835 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 CCL11P51671 97 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 KPNA2P52292 529 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 GPS2Q13227 327 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 KRT33BQ14525 404 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 BCL7AQ4VC05 210 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 CCDC181Q5TID7 509 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 CAPRIN2Q6IMN6 1127 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 DAAM2Q86T65 1068 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 SYVN1Q86TM6 617 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 LILRA3Q8N6C8 439 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 SLC38A9Q8NBW4 561 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 OR13C4Q8NGS5 318 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 THAP4Q8WY91 577 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 SEC14L1Q92503 715 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 KRT35Q92764 455 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 DCUN1D1Q96GG9 259 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 LINC00615Q96LM1 132 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 RMDN2Q96LZ7 410 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 KIR3DX1Q9H7L2 352 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 SOHLH2Q9NX45 425 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 SPTBP11277 2137 aa13.04□□□□□ -0.32
POLR2J3-217ENST00000513438 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 MED13Q9UHV7 2174 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 ARGFXA6NJG6 315 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 SLC9B1P1A6NJY1 282 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 AGAP14A8MT82 685 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 CPNE3O75131 537 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 KLK3P07288 261 aaPredicted RBP13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 SLC35G4P0C7Q5 338 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 PYGMP11217 842 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 CDH3P22223 829 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 NDUFS1P28331 727 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 TMPRSS15P98073 1019 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 CHAF1BQ13112 559 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 MSLNQ13421 630 aaPredicted RBP13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 LAMB3Q13751 1172 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 PRPSAP1Q14558 356 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms