RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ME3Q16798 604 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 SGSM1Q2NKQ1 1148 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 RILPL1Q5EBL4 403 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF667Q5HYK9 610 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 SUMO4Q6EEV6 95 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 PM20D1Q6GTS8 502 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 Q6ZSR6 202 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ACOT1Q86TX2 421 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 VASH2Q86V25 355 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 PARGQ86W56 976 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 HORMAD1Q86X24 394 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 MFN1Q8IWA4 741 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 UNC45BQ8IWX7 931 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC35F3Q8IY50 421 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CCDC13Q8IYE1 715 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC22A18ASQ8N1D0 253 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 STK40Q8N2I9 435 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TMIEQ8NEW7 156 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TSPEARQ8WU66 669 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ASB12Q8WXK4 309 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 OR8D1Q8WZ84 308 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 RAD54LQ92698 747 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CYFIP2Q96F07 1278 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 FEM1CQ96JP0 617 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 BMFQ96LC9 184 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 LENG8Q96PV6 779 aaPredicted RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TAAR9Q96RI9 348 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 LLPHQ9BRT6 129 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CBWD1Q9BRT8 395 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ADI1Q9BV57 179 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CALN1Q9BXU9 219 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 DUSP16Q9BY84 665 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC17A9Q9BYT1 436 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 INTS2Q9H0H0 1204 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 LRRN3Q9H3W5 708 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ABCC13Q9NSE7 274 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 BLOC1S4Q9NUP1 217 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TBC1D7Q9P0N9 293 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 PISDQ9UG56 409 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 IPO11Q9UI26 975 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 SLCO3A1Q9UIG8 710 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 RASAL2Q9UJF2 1139 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ADAM21Q9UKJ8 722 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 LOXL2Q9Y4K0 774 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TRPM6Q9BX84 2022 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TRGV11A0A075B6L2 103 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 A1L4Q6 167 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 GOLGA8IPA6NC78 632 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 GOLGA8JA6NMD2 632 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 FPGTO14772 594 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 EIF3DO15371 548 aaKnown RBP eCLIP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 TBL1XO60907 577 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 RTN2O75298 545 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 FAM155BO75949 473 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 CNTN5O94779 1100 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ENDOD1O94919 500 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 RPLP0P05388 317 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ANXA6P08133 673 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 HMBSP08397 361 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ALPIP09923 528 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ELFN1P0C7U0 828 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 HGFP14210 728 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 IDEP14735 1019 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF18P17022 549 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 UGT1A3P35503 534 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 NR4A2P43354 598 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 UQCRFS1P47985 274 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC11A2P49281 568 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 COPB1P53618 953 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC8A3P57103 927 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 TAS2R38P59533 333 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 MYL6P60660 151 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 YWHAGP61981 247 aaKnown RBP eCLIP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 RPS21P63220 83 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 CCL7P80098 99 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 CNTN1Q12860 1018 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 PIN1Q13526 163 aaPredicted RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 TRA2AQ13595 282 aaKnown RBP eCLIP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 PSMD6Q15008 389 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ELOCQ15369 112 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 SNRNP35Q16560 246 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 MST1LQ2TV78 715 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 EIF2S3LQ2VIR3 472 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF284Q2VY69 593 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 DEFB133Q30KQ1 61 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 RAB41Q5JT25 222 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 NUGGCQ68CJ6 796 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 KIAA1161Q6NSJ0 714 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 CRTC1Q6UUV9 634 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 KYAT3Q6YP21 454 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 SPNS3Q6ZMD2 512 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF782Q6ZMW2 699 aaPredicted RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 GCNT7Q6ZNI0 430 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ASB18Q6ZVZ8 466 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 STXBP4Q6ZWJ1 553 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 HPS6Q86YV9 775 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 MIER2Q8N344 545 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 FSTL5Q8N475 847 aaPredicted RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 TTC39CQ8N584 583 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 ARL10Q8N8L6 244 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms