RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 BTRCQ9Y297 605 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 TTLL3Q9Y4R7 772 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 ARHGAP10A1A4S6 786 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 IGHEP01854 428 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 SERPING1P05155 500 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 MSL3P1P0C860 447 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 TCF4P15884 667 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 ITGA3P26006 1051 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 CDC25BP30305 580 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 HNRNPH3P31942 346 aaKnown RBP13.57□□□□□ -0.24
SPCS3-204ENST00000513139 DMPKQ09013 629 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 PLCL1Q15111 1095 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 RPE65Q16518 533 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 CCDC122Q5T0U0 273 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 ALS2CLQ60I27 953 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 SP5Q6BEB4 398 aaPredicted RBP13.57□□□□□ -0.24
SPCS3-204ENST00000513139 FAM198BQ6UWH4 519 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 Q6ZS92 163 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 TMC3Q7Z5M5 1100 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 MCEMP1Q8IX19 187 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 GPR150Q8NGU9 434 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 ZFPM2Q8WW38 1151 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 TM9SF4Q92544 642 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 CLIP3Q96DZ5 547 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 FER1L6-AS2Q96M78 137 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 VPS35Q96QK1 796 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 CHP1Q99653 195 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 UNKQ9C0B0 810 aaKnown RBP13.57□□□□□ -0.24
SPCS3-204ENST00000513139 FANCEQ9HB96 536 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 MAGEE1Q9HCI5 957 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 HRASLS2Q9NWW9 162 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 TRIM10Q9UDY6 481 aa13.57□□□□□ -0.24
SPCS3-204ENST00000513139 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.241e-20■■■■□ 19.3
SPCS3-204ENST00000513139 LRRTM2O43300 516 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 MFSD11O43934 449 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 FTLP02792 175 aaPredicted RBP13.56□□□□□ -0.24
SPCS3-204ENST00000513139 HLA-DQB2P05538 268 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 MMP2P08253 660 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 HADHAP40939 763 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 TMEM115Q12893 351 aaPredicted RBP13.56□□□□□ -0.24
SPCS3-204ENST00000513139 RAPSNQ13702 412 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 PIGHQ14442 188 aaPredicted RBP13.56□□□□□ -0.24
SPCS3-204ENST00000513139 NCF4Q15080 339 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 PAFAH1B3Q15102 231 aaKnown RBP13.56□□□□□ -0.24
SPCS3-204ENST00000513139 KYNUQ16719 465 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 KHDC1Q4VXA5 237 aaKnown RBP13.56□□□□□ -0.24
SPCS3-204ENST00000513139 FAM69BQ5VUD6 431 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 AMZ2Q86W34 360 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 OOSP2Q86WS3 158 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 TRAPPC5Q8IUR0 188 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 CNGA4Q8IV77 575 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 SYTL1Q8IYJ3 562 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 ZADH2Q8N4Q0 377 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 CLEC1AQ8NC01 280 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 BRSK1Q8TDC3 778 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 INPP5DQ92835 1189 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 DHRS4Q9BTZ2 278 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 PCMTD2Q9NV79 361 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 NTNG1Q9Y2I2 539 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 PADI2Q9Y2J8 665 aa13.56□□□□□ -0.24
SPCS3-204ENST00000513139 MTX2O75431 263 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 MYBL1P10243 752 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 CD86P42081 329 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 GLRBP48167 497 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 SOX8P57073 446 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 ADCY2Q08462 1091 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 ABRQ12979 859 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 GTF2H3Q13889 308 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 TXNRD3NBQ6F5E7 133 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 MRGPREQ86SM8 312 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 KCNMB4Q86W47 210 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 GALNT16Q8N428 558 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 NIPA2Q8N8Q9 360 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 ZNF653Q96CK0 615 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 TRIM11Q96F44 468 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 ZNF552Q9H707 407 aaPredicted RBP13.55□□□□□ -0.24
SPCS3-204ENST00000513139 ACTR5Q9H9F9 607 aaPredicted RBP13.55□□□□□ -0.24
SPCS3-204ENST00000513139 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
SPCS3-204ENST00000513139 SOHLH2Q9NX45 425 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 TMPRSS11EQ9UL52 423 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 BZW2Q9Y6E2 419 aaKnown RBP13.55□□□□□ -0.24
SPCS3-204ENST00000513139 DNMT3AQ9Y6K1 912 aaPredicted RBP13.55□□□□□ -0.24
SPCS3-204ENST00000513139 PCNX1Q96RV3 2341 aa13.55□□□□□ -0.24
SPCS3-204ENST00000513139 A0A087X0T9 212 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 C9J4A7 227 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 F5H423 210 aaPredicted RBP13.54□□□□□ -0.24
SPCS3-204ENST00000513139 FAM228BP0C875 321 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 MTHFD1P11586 935 aaKnown RBP13.54□□□□□ -0.24
SPCS3-204ENST00000513139 BPIP17213 487 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 KPNA2P52292 529 aaKnown RBP13.54□□□□□ -0.24
SPCS3-204ENST00000513139 SLC25A11Q02978 314 aaKnown RBP13.54□□□□□ -0.24
SPCS3-204ENST00000513139 GALNT3Q14435 633 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 KRT81Q14533 505 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 SSPNQ14714 243 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 ZXDCQ2QGD7 858 aaPredicted RBP13.54□□□□□ -0.24
SPCS3-204ENST00000513139 KRTAP21-3Q3LHN1 58 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 ZNF789Q5FWF6 425 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 DCAF10Q5QP82 559 aa13.54□□□□□ -0.24
SPCS3-204ENST00000513139 PRAMEF17Q5VTA0 474 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms