RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TXNDC16Q9P2K2 825 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 KLHL42Q9P2K6 505 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 SLC23A2Q9UGH3 650 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 PLEKHM1Q9Y4G2 1056 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 PCYT1BQ9Y5K3 369 aaPredicted RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 RNF215Q9Y6U7 377 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 U3KQA8 63 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 KNTC1P50748 2209 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 LILRA5A6NI73 299 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 GOLGA8KD6RF30 607 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 GOLGA8TH3BQL2 631 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 SGTAO43765 313 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 DUX1O43812 170 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 OR1I1O60431 355 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 PRSS56P0CW18 603 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 MTHFD1P11586 935 aaKnown RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 JUPP14923 745 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 ALDH4A1P30038 563 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 STX2P32856 288 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 UBE2IP63279 158 aaKnown RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 MRPS25P82663 173 aaKnown RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 SHC2P98077 582 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 FOXC1Q12948 553 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 BOP1Q14137 746 aaKnown RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 MAP9Q49MG5 647 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 MSS51Q4VC12 460 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 HSP90AA5PQ58FG0 334 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 LRRC8EQ6NSJ5 796 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 DHRS13Q6UX07 377 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 UNC5AQ6ZN44 842 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 CYS1Q717R9 158 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 TMPRSS7Q7RTY8 843 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 SPRED1Q7Z699 444 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 SLCO6A1Q86UG4 719 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 PDZD3Q86UT5 571 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 CCDC25Q86WR0 208 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 CNPY4Q8N129 248 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 NOA1Q8NC60 698 aaKnown RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 C2CD4AQ8NCU7 369 aaPredicted RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 FBXO25Q8TCJ0 367 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 LPGAT1Q92604 370 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 KCNJ9Q92806 393 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 C12orf66Q96MD2 445 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 FOPNLQ96NB1 174 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 TMEM74Q96NL1 305 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 GFM1Q96RP9 751 aaKnown RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 FMO2Q99518 471 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 KRTAP3-3Q9BYR6 98 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 KRTAP3-2Q9BYR7 98 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 STRADBQ9C0K7 418 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 LRRN3Q9H3W5 708 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 MVB12BQ9H7P6 319 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 SYNDIG1Q9H7V2 258 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 SAYSD1Q9NPB0 183 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 IARS2Q9NSE4 1012 aaKnown RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 IMP3Q9NV31 184 aaKnown RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 AKAP7Q9P0M2 348 aaPredicted RBP8.95□□□□□ -0.98
NUP54-207ENST00000508583 FAM8A1Q9UBU6 413 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 FBXO5Q9UKT4 447 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 ANGPTL2Q9UKU9 493 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 CLCA2Q9UQC9 943 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 NEUROG3Q9Y4Z2 214 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 ST14Q9Y5Y6 855 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 SPTBN2O15020 2390 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 RP1P56715 2156 aa8.95□□□□□ -0.98
NUP54-207ENST00000508583 CACNA1AO00555 2505 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 D6RAR5 112 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 TP73O15350 636 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 CPNE6O95741 557 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 S1PR4O95977 384 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 MT-CO3P00414 261 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 RPLP0P05388 317 aaKnown RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 ERVK-10P10266 1014 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 PKMP14618 531 aaKnown RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 CHRM3P20309 590 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 ATP5DP30049 168 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 CA5AP35218 305 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 PHBP35232 272 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 SKIV2L2P42285 1042 aaKnown RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 SLC1A2P43004 574 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 INSM1Q01101 510 aaPredicted RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 MGAT5Q09328 741 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 EIF3IQ13347 325 aaKnown RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 SQSTM1Q13501 440 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 SEMA3AQ14563 771 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 PLCL1Q15111 1095 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 RPE65Q16518 533 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 PLEKHS1Q5SXH7 462 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 HES3Q5TGS1 186 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 TTC23LQ6PF05 361 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 FAM83HQ6ZRV2 1179 aaPredicted RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 TMEM26Q6ZUK4 368 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 LDB1Q86U70 411 aaPredicted RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 PIM3Q86V86 326 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 SLC26A11Q86WA9 606 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 PLXDC1Q8IUK5 500 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 ANKMY2Q8IV38 441 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 AGGF1Q8N302 714 aaeCLIP8.94□□□□□ -0.98
NUP54-207ENST00000508583 RAB42Q8N4Z0 105 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms