RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 NOL11Q9H8H0 719 aaKnown RBP3.9□□□□□ -1.79
HMGB1P28-201ENST00000507778 ANKZF1Q9H8Y5 726 aa3.9□□□□□ -1.79
HMGB1P28-201ENST00000507778 FKRPQ9H9S5 495 aa3.9□□□□□ -1.79
HMGB1P28-201ENST00000507778 EBF2Q9HAK2 575 aa3.9□□□□□ -1.79
HMGB1P28-201ENST00000507778 LRRC4Q9HBW1 653 aa3.9□□□□□ -1.79
HMGB1P28-201ENST00000507778 DLGAP4Q9Y2H0 992 aa3.9□□□□□ -1.79
HMGB1P28-201ENST00000507778 PRSS51A0A1B0GVH4 220 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 ELOVL7A1L3X0 281 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 ANKUB1A6NFN9 424 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 XRCC3O43542 346 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 GPR137BO60478 399 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 DIAPH2O60879 1101 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 MED24O75448 989 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 LDLRP01130 860 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 FYNP06241 537 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 KRT19P08727 400 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 CCDC175P0C221 793 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 PLA2G2AP14555 144 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 RAB28P51157 221 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 ZNF75DP51815 510 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 TROAPQ12815 778 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 HSPB3Q12988 150 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 CAMK2DQ13557 499 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 SPECC1Q5M775 1068 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 RNASEH2BQ5TBB1 312 aaKnown RBP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 ARMC3Q5W041 872 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 C9orf57Q5W0N0 161 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 KLC3Q6P597 504 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 FAM171BQ6P995 826 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 RBPMS2Q6ZRY4 209 aaKnown RBP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 TUBA1AQ71U36 451 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 RBM23Q86U06 439 aaKnown RBP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 PTOV1Q86YD1 416 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 ZNF595Q8IYB9 648 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 XXYLT1Q8NBI6 393 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 OR2AJ1Q8NGZ0 328 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 MOSPD2Q8NHP6 518 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 ZFAND2BQ8WV99 257 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 OXNAD1Q96HP4 312 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 LINC00615Q96LM1 132 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 IL17FQ96PD4 163 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 OLFM1Q99784 485 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 TUBA1CQ9BQE3 449 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 FNDC11Q9BVV2 318 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 C1QTNF4Q9BXJ3 329 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 WNT5BQ9H1J7 359 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 DDX31Q9H8H2 851 aaKnown RBP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 CNOT10Q9H9A5 744 aaKnown RBP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 MBNL1Q9NR56 388 aaKnown RBP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 KLHL1Q9NR64 748 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 MIOSQ9NXC5 875 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 NPAP1Q9NZP6 1156 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 STK26Q9P289 416 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 RHCGQ9UBD6 479 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 PCSK5Q92824 1860 aa3.89□□□□□ -1.79
HMGB1P28-201ENST00000507778 PLSCR5A0PG75 271 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 ASPDHA6ND91 283 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 TULP2O00295 520 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 SPRY1O43609 319 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 TOMM70O94826 608 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 GCNT3O95395 438 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 TFAP2AP05549 437 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 QDPRP09417 244 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 ERCC2P18074 760 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 PCGF2P35227 344 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 AHRP35869 848 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 PSMC4P43686 418 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 SLC9A3P48764 834 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 ZNF41P51814 821 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 FUT6P51993 359 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 COG2Q14746 738 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 PTPRCAPQ14761 206 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 IZUMO4Q1ZYL8 232 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 ASPRV1Q53RT3 343 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 NDUFAF5Q5TEU4 345 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 FAM198BQ6UWH4 519 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 PRSS57Q6UWY2 283 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 PLXDC2Q6UX71 529 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 KRT77Q7Z794 578 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 CENPVQ7Z7K6 275 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 SLFN11Q7Z7L1 901 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 VSIG1Q86XK7 387 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 LMO3Q8TAP4 145 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 ATL1Q8WXF7 558 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 SORCS1Q8WY21 1168 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 MRPS27Q92552 414 aaKnown RBP3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 DAZLQ92904 295 aaKnown RBP3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 SLAMF9Q96A28 289 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 LINGO1Q96FE5 620 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 ABHD8Q96I13 439 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 NAA11Q9BSU3 229 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 NUP85Q9BW27 656 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 DPAGT1Q9H3H5 408 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 TBC1D17Q9HA65 648 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 TRPC7Q9HCX4 862 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 PRMT7Q9NVM4 692 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 DPP3Q9NY33 737 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 SLC24A2Q9UI40 661 aa3.88□□□□□ -1.79
HMGB1P28-201ENST00000507778 TUBE1Q9UJT0 475 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms