RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	LRRC8B	Q6P9F7	803 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	XKR5	Q6UX68	686 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ZNF534	Q76KX8	674 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ARHGAP22	Q7Z5H3	698 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PDZD3	Q86UT5	571 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ART4	Q93070	314 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	RMDN2	Q96LZ7	410 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TTC1	Q99614	292 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	DPH1	Q9BZG8	443 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	IL22	Q9GZX6	179 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	COG4	Q9H9E3	785 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SYBU	Q9NX95	663 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SLC39A1	Q9NY26	324 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ANAPC5	Q9UJX4	755 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	RIMKLB	Q9ULI2	386 aa		13.83	□□□□□ -0.2
CCHCR1-222	ENST00000507459	GOLGA6L10	A0A0M3HER8	536 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	C17orf113	A0A1B0GUU1	675 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	OR1I1	O60431	355 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PHF2	O75151	1096 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	AVIL	O75366	819 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	RASSF9	O75901	435 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	AP2A2	O94973	939 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	NMBR	P28336	390 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CAPZB	P47756	277 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PREP	P48147	710 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	LEPR	P48357	1165 aa	Known RBP	13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SEPHS1	P49903	392 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CXADR	P78310	365 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SARNP	P82979	210 aa	Known RBP	13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CDK16	Q00536	496 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ACVR1	Q04771	509 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CLN3	Q13286	438 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SEMA3A	Q14563	771 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	BRD3	Q15059	726 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TGIF1	Q15583	401 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	LYPLAL1	Q5VWZ2	237 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ANKRD22	Q5VYY1	191 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ZNF449	Q6P9G9	518 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CES3	Q6UWW8	571 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	NAPRT	Q6XQN6	538 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	FAM92B	Q6ZTR7	304 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	LDB1	Q86U70	411 aa	Predicted RBP	13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ZFAND4	Q86XD8	727 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PMEPA1	Q969W9	287 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	C9orf72	Q96LT7	481 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TAAR9	Q96RI9	348 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	FERD3L	Q96RJ6	166 aa		13.82	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PIKFYVE	Q9Y2I7	2098 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	GOLGA8M	H3BSY2	632 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	QSOX1	O00391	747 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	IFRD1	O00458	451 aa	Predicted RBP	13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CES2	O00748	559 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	KIF1C	O43896	1103 aa	Known RBP	13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	C9	P02748	559 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	OR56A5	P0C7T3	313 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TCP1	P17987	556 aa	Known RBP	13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ITGB6	P18564	788 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PDHA2	P29803	388 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PPARG	P37231	505 aa	Predicted RBP	13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PPP1CA	P62136	330 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	KCNJ11	Q14654	390 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CASC4	Q6P4E1	433 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CERS6	Q6ZMG9	384 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	OTUD6B	Q8N6M0	293 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	GRK7	Q8WTQ7	553 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CPT1B	Q92523	772 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ELMO1	Q92556	727 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PEX13	Q92968	403 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	MFSD3	Q96ES6	412 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ZDHHC12	Q96GR4	267 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CAPZA3	Q96KX2	299 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	FCRL3	Q96P31	734 aa	Predicted RBP	13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CTRC	Q99895	268 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	OR52A5	Q9H2C5	316 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CPNE5	Q9HCH3	593 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TREX1	Q9NSU2	369 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CATSPERZ	Q9NTU4	200 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	B3GALT1	Q9Y5Z6	326 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	COLEC10	Q9Y6Z7	277 aa		13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	MN1	Q10571	1320 aa	Predicted RBP	13.81	□□□□□ -0.2
CCHCR1-222	ENST00000507459	AHCTF1	Q8WYP5	2266 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459		B4E171	279 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CD3EAP	O15446	510 aa	Known RBP	13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TMEM63A	O94886	807 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	FTH1	P02794	183 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TSPAN7	P41732	249 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	FNTA	P49354	379 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CSE1L	P55060	971 aa	Known RBP	13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	BOP1	Q14137	746 aa	Known RBP	13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PPP1R7	Q15435	360 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	AARS2	Q5JTZ9	985 aa	Known RBP	13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	DCAF12	Q5T6F0	453 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CACHD1	Q5VU97	1274 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ANKS6	Q68DC2	871 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	KLHL35	Q6PF15	583 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PACS1	Q6VY07	963 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PHC3	Q8NDX5	983 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms