RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 LRRC61Q9BV99 259 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 SMOC1Q9H4F8 434 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 GPAMQ9HCL2 828 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 KLC4Q9NSK0 619 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 PCMTD2Q9NV79 361 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 TRNAU1APQ9NX07 287 aaKnown RBP13.92□□□□□ -0.18
RNF4-208ENST00000507247 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.92□□□□□ -0.18
RNF4-208ENST00000507247 KLHL42Q9P2K6 505 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 APOBEC3BQ9UH17 382 aaKnown RBP13.92□□□□□ -0.18
RNF4-208ENST00000507247 TSR3Q9UJK0 312 aaKnown RBP13.92□□□□□ -0.18
RNF4-208ENST00000507247 RAB23Q9ULC3 237 aa13.92□□□□□ -0.18
RNF4-208ENST00000507247 ARHGEF17Q96PE2 2063 aaPredicted RBP13.91□□□□□ -0.18
RNF4-208ENST00000507247 GOLGA6L10A6NI86 522 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 LIN7AO14910 233 aaPredicted RBP13.91□□□□□ -0.18
RNF4-208ENST00000507247 KPNA5O15131 536 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 TSPAN12O95859 305 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 MPOP05164 745 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 APOA4P06727 396 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 PYGBP11216 843 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 CRABP2P29373 138 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 PDHA2P29803 388 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 SKIV2L2P42285 1042 aaKnown RBP13.91□□□□□ -0.18
RNF4-208ENST00000507247 HSPA14Q0VDF9 509 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 GRIK2Q13002 908 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 TRIM61Q5EBN2 209 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 PLEKHS1Q5SXH7 462 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 AGBL2Q5U5Z8 902 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 LAIR1Q6GTX8 287 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 SLC23A3Q6PIS1 610 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 RABEPKQ7Z6M1 372 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 EXOC3L1Q86VI1 746 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 SRRM1Q8IYB3 904 aaKnown RBP13.91□□□□□ -0.18
RNF4-208ENST00000507247 CENPLQ8N0S6 344 aaPredicted RBP13.91□□□□□ -0.18
RNF4-208ENST00000507247 C4orf33Q8N1A6 199 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 PLD6Q8N2A8 252 aaKnown RBP13.91□□□□□ -0.18
RNF4-208ENST00000507247 SPATA6LQ8N4H0 392 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 CEP76Q8TAP6 659 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 EEF1AKMT1Q8WVE0 214 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 TLCD1Q96CP7 247 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 UNKQ9C0B0 810 aaKnown RBP13.91□□□□□ -0.18
RNF4-208ENST00000507247 VPS11Q9H270 941 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 ACBD3Q9H3P7 528 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 ERVMER34-1Q9H9K5 563 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 NOVA2Q9UNW9 492 aaKnown RBP13.91□□□□□ -0.18
RNF4-208ENST00000507247 PCDHGA5Q9Y5G8 931 aa13.91□□□□□ -0.18
RNF4-208ENST00000507247 A0A087X1B8 175 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 OPA1O60313 960 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 GFRA3O60609 400 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 SLCO2B1O94956 709 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 CCDC166P0CW27 439 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 KRT4P19013 534 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 BLKP51451 505 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 CLCNKAP51800 687 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 SLC18A2Q05940 514 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 C1orf61Q13536 156 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 CSHL1Q14406 222 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 SHBQ15464 509 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 TTLL9Q3SXZ7 439 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 SYTL3Q4VX76 610 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 TAF1BQ53T94 588 aaPredicted RBP13.9□□□□□ -0.18
RNF4-208ENST00000507247 PRRT3Q5FWE3 981 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 METRNLQ641Q3 311 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 ASCL5Q7RTU5 278 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 CLEC14AQ86T13 490 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 CNPY4Q8N129 248 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 GPBAR1Q8TDU6 330 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 ACMSDQ8TDX5 336 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 KCTD4Q8WVF5 259 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 ASZ1Q8WWH4 475 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 GLMNQ92990 594 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 TMEM159Q96B96 161 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 LINGO1Q96FE5 620 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 UBXN10Q96LJ8 280 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 SLC13A1Q9BZW2 595 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 OR52A5Q9H2C5 316 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 OSGEPL1Q9H4B0 414 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 SYTL2Q9HCH5 934 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 IGSF5Q9NSI5 407 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 TLK1Q9UKI8 766 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 IKZF3Q9UKT9 509 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 SLC6A14Q9UN76 642 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 ACOT9Q9Y305 439 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 PIEZO1Q92508 2521 aa13.9□□□□□ -0.18
RNF4-208ENST00000507247 KNL1Q8NG31 2342 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 KLHL33A6NCF5 533 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 H3BM21 787 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 KCNJ13O60928 360 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 SDC3O75056 442 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 PIAS2O75928 621 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 CTSEP14091 401 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 VCLP18206 1134 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 DGKAP23743 735 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 ATP5DP30049 168 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 ACTR1BP42025 376 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 IL2P60568 153 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 ACTR1AP61163 376 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 IRX4P78413 519 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 LRP8Q14114 963 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 ZNF423Q2M1K9 1284 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms