RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TMEM98Q9Y2Y6 226 aa8.3□□□□□ -1.08
PDGFC-205ENST00000506880 DHRS7Q9Y394 339 aa8.3□□□□□ -1.08
PDGFC-205ENST00000506880 TCRBV9S1A1TA0A576 114 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 SLC16A5O15375 505 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 SIGLEC6O43699 453 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 BUD23O43709 281 aaKnown RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 SH3BP5O60239 455 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 NOBOXO60393 691 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 FUCA1P04066 466 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 MPC1LP0DKB6 136 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 ACP5P13686 325 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 SLC1A2P43004 574 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 ACADVLP49748 655 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 UBE2IP63279 158 aaKnown RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 TMPRSS15P98073 1019 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 DAB2P98082 770 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 SLC7A5Q01650 507 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 HHEXQ03014 270 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 BNIP3Q12983 259 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 RSPO4Q2I0M5 234 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 SYTL3Q4VX76 610 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 KHDC1Q4VXA5 237 aaKnown RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 HSP90AA5PQ58FG0 334 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 DOK6Q6PKX4 331 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 WDR74Q6RFH5 385 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 RD3Q7Z3Z2 195 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 NAGSQ8N159 534 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 AGGF1Q8N302 714 aaeCLIP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 RIBC1Q8N443 379 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 NKAPQ8N5F7 415 aaKnown RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 GPATCH11Q8N954 259 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 ADAMTS14Q8WXS8 1223 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 INPP5DQ92835 1189 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 SLC22A18Q96BI1 424 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 MTBPQ96DY7 904 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 SGF29Q96ES7 293 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 CABS1Q96KC9 395 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 MCMBPQ9BTE3 642 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 AARSD1Q9BTE6 412 aaKnown RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 CHRNA10Q9GZZ6 450 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 TFB2MQ9H5Q4 396 aaKnown RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 KIR3DX1Q9H7L2 352 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 IL21RQ9HBE5 538 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 LRRC4CQ9HCJ2 640 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 KLC4Q9NSK0 619 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 PIH1D1Q9NWS0 290 aaKnown RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 CPNE7Q9UBL6 633 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 RAB21Q9UL25 225 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
PDGFC-205ENST00000506880 ENTPD2Q9Y5L3 495 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 IKBKGQ9Y6K9 419 aa8.29□□□□□ -1.08
PDGFC-205ENST00000506880 A0A0U1RQS6 177 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 OR2AG2A6NM03 316 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 RHPN2P1A8MT19 583 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TRIM38O00635 465 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 HGSO14964 777 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 DUX1O43812 170 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 ERLIN1O75477 346 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 KRT38O76015 456 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 KCNK5O95279 499 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 VIPP01282 170 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 C8GP07360 202 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 ENO2P09104 434 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 MSL3P1P0C860 447 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 MTHFD1P11586 935 aaKnown RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 ACADLP28330 430 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 CRABP2P29373 138 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 ECHS1P30084 290 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 ID4P47928 161 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 CTSCP53634 463 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 LIMK2P53671 638 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 AP1S2P56377 157 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 BIRC2Q13490 618 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 PTPRCAPQ14761 206 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 CCDC6Q16204 474 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TEX35Q5T0J7 233 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 METTL2BQ6P1Q9 378 aaKnown RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 SLC30A9Q6PML9 568 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 IGF2-ASQ6U949 168 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 LAYNQ6UX15 382 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 CCNI2Q6ZMN8 369 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TMEM26Q6ZUK4 368 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TRIM74Q86UV6 250 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 BPHLQ86WA6 291 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 ZC3HC1Q86WB0 502 aaKnown RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 KMT5CQ86Y97 462 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TDRPQ86YL5 185 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 PLXDC1Q8IUK5 500 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 DCUN1D3Q8IWE4 304 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TRIM48Q8IWZ4 208 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 SLC35F3Q8IY50 421 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 MREGQ8N565 214 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 EID2Q8N6I1 236 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 ACVR1CQ8NER5 493 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 OR10G6Q8NH81 332 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 OR5K2Q8NHB8 316 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 HMGCLL1Q8TB92 370 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 IFT81Q8WYA0 676 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 ELMO1Q92556 727 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 CAVIN3Q969G5 261 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms