RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 COPS8Q99627 209 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 CTRCQ99895 268 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 SLC12A9Q9BXP2 914 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 WWP1Q9H0M0 922 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 ZDHHC3Q9NYG2 299 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 PSMD13Q9UNM6 376 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 PIKFYVEQ9Y2I7 2098 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 GOLGA6L3A6NEY3 463 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 CFAP99D6REC4 459 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 POLR1CO15160 346 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 STK17BO94768 372 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 PRSS56P0CW18 603 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 RALBP11234 206 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 LIFP15018 202 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 NELFEP18615 380 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 ACRV1P26436 265 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 FOXN2P32314 431 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 FDFT1P37268 417 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 PPP1CAP62136 330 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 SH3BP2P78314 561 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 CCZ1BP86790 482 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 CCZ1P86791 482 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 CACNG1Q06432 222 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 CDH17Q12864 832 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 SEMA5AQ13591 1074 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 MAP7Q14244 749 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 POU6F1Q14863 301 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 DBN1Q16643 649 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 KLHL35Q6PF15 583 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 LINC00523Q86TU6 105 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 SERPINA9Q86WD7 417 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 NLGN4XQ8N0W4 816 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 TAB3Q8N5C8 712 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 IL22RA1Q8N6P7 574 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 EXD3Q8N9H8 876 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 GLIS1Q8NBF1 620 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 NLGN4YQ8NFZ3 816 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 C1orf54Q8WWF1 131 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 UBXN4Q92575 508 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 MED8Q96G25 268 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 DCUN1D1Q96GG9 259 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 ZDHHC12Q96GR4 267 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 CDKN2AIPNLQ96HQ2 116 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 C12orf66Q96MD2 445 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 OR52A5Q9H2C5 316 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 FAM96AQ9H5X1 160 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 KIR3DX1Q9H7L2 352 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 ETNK1Q9HBU6 452 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 IMP3Q9NV31 184 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 SLC24A2Q9UI40 661 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 RIMKLBQ9ULI2 386 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 CFAP20Q9Y6A4 193 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-209ENST00000506632 IGHV5-51A0A0C4DH38 117 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 LOC101059948A0A1B0GTJ6 334 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 OR5K3A6NET4 321 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 RASSF9O75901 435 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 GSTM1P09488 218 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 CCDC175P0C221 793 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 SLC35G4P0C7Q5 338 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 FGF5P12034 268 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 ZNF28P17035 718 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 MAP4P27816 1152 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 NDUFS1P28331 727 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 GRIA1P42261 906 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 SEPHS1P49903 392 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 CYP4F2P78329 520 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 GSTM4Q03013 218 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 ACVR1Q04771 509 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 ABHD18Q0P651 414 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 SEPT6Q14141 434 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 IL11RAQ14626 422 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 RPS6KA1Q15418 735 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 CCNG2Q16589 344 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 TBR1Q16650 682 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 ZRANB3Q5FWF4 1079 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 CACHD1Q5VU97 1274 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 IRGCQ6NXR0 463 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 DUS1LQ6P1R4 473 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 DRICH1Q6PGQ1 229 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 PACS1Q6VY07 963 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 FAM92BQ6ZTR7 304 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 PRUNE1Q86TP1 453 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 LRRC8AQ8IWT6 810 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 OR52K1Q8NGK4 314 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 OR13J1Q8NGT2 312 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 EXTL1Q92935 676 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 SLC45A3Q96JT2 553 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 RANBP9Q96S59 729 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 CD180Q99467 661 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 MAP3K3Q99759 626 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 CCM2Q9BSQ5 444 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 TLR10Q9BXR5 811 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 TRIT1Q9H3H1 467 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 COG4Q9H9E3 785 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 PRM3Q9NNZ6 103 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 CASS4Q9NQ75 786 aa8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 PIH1D1Q9NWS0 290 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-209ENST00000506632 ZNF148Q9UQR1 794 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms