RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 GSTM4Q03013 218 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 SQSTM1Q13501 440 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 GPR18Q14330 331 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 BBS9Q3SYG4 887 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 DNAJC21Q5F1R6 531 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 UNC5BQ8IZJ1 945 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 MDM1Q8TC05 714 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 C12orf66Q96MD2 445 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 ERP44Q9BS26 406 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 NRSN2Q9GZP1 204 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 IMP3Q9NV31 184 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 OGFRQ9NZT2 677 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 ZZEF1O43149 2961 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 IQCF5A8MTL0 148 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 SMAPO00193 183 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 DUX1O43812 170 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 PROS1P07225 676 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 SLC35G4P0C7Q5 338 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 ITGB6P18564 788 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 PGAM1P18669 254 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 OGNP20774 298 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 PPARGP37231 505 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 MAPK9P45984 424 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 CKAP4Q07065 602 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 CRYMQ14894 314 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 RTP5Q14D33 572 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 CLPPQ16740 277 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 ZNF789Q5FWF6 425 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 CTSL3PQ5NE16 218 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 MRNIPQ6NTE8 343 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 NEPROQ6NW34 567 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 CENPUQ71F23 418 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 MAATS1Q7Z4T9 603 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 PIM3Q86V86 326 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 CILP2Q8IUL8 1156 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 OR10G6Q8NH81 332 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 JPH3Q8WXH2 748 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 ELMO1Q92556 727 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 LPGAT1Q92604 370 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 GRAMD1AQ96CP6 724 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 NXPE2Q96DL1 559 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 LIN37Q96GY3 246 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 EBNA1BP2Q99848 306 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 DPH5Q9H2P9 285 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 EPB41L5Q9HCM4 733 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 GRHL1Q9NZI5 618 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 MRFAP1Q9Y605 127 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 USP24Q9UPU5 2620 aa17.83■□□□□ 0.44
PDLIM7-216ENST00000506537 IGHV5-10-1A0A0J9YXX1 117 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 SLC5A10A0PJK1 596 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 LIN7AO14910 233 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 ZW10O43264 779 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 NDUFS3O75489 264 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 MPOP05164 745 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 RPS3P23396 243 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 CCR7P32248 378 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 CYP4F3Q08477 520 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 RPA4Q13156 261 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 BOP1Q14137 746 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 BRD3Q15059 726 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 HIF1AQ16665 826 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 LONRF1Q17RB8 773 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 WHAMMP3Q1A5X7 153 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 C3orf38Q5JPI3 329 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 HP1BP3Q5SSJ5 553 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 DUPD1Q68J44 220 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 ZNF470Q6ECI4 717 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 DENND6AQ8IWF6 608 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 RBM12BQ8IXT5 1001 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 KRT222Q8N1A0 295 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 TMEM74Q96NL1 305 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 BIRC8Q96P09 236 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 SATB2Q9UPW6 733 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 FAM169AQ9Y6X4 670 aa17.82■□□□□ 0.44
PDLIM7-216ENST00000506537 CCDC187A0A096LP49 1063 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 UBA6A0AVT1 1052 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 KIF2AO00139 706 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 BRINP1O60477 761 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 THRAP10827 490 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 TYRP1P17643 537 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 MPSTP25325 297 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 ELK3P41970 407 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 SLC1A2P43004 574 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 LIMK2P53671 638 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 EIF3BP55884 814 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 ARL4CP56559 192 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 GABREP78334 506 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 PHF19Q5T6S3 580 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 SDCCAG8Q86SQ7 713 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 PDZD3Q86UT5 571 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 PDIK1LQ8N165 341 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 KDF1Q8NAX2 398 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 RCBTB1Q8NDN9 531 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 OR4D9Q8NGE8 314 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 RSC1A1Q92681 617 aa17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 PRR11Q96HE9 360 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 AHCYL2Q96HN2 611 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-216ENST00000506537 CCDC74BQ96LY2 380 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms