RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 FBXO6Q9NRD1 293 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-208ENST00000504489 SIRPGQ9P1W8 387 aa11.68□□□□□ -0.54
PDLIM5-208ENST00000504489 PADI4Q9UM07 663 aa11.68□□□□□ -0.54
PDLIM5-208ENST00000504489 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
PDLIM5-208ENST00000504489 CRYL1Q9Y2S2 319 aa11.68□□□□□ -0.54
PDLIM5-208ENST00000504489 KIR2DS5A0A0G2JLQ3 304 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 A0A0G2JNG1 304 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 TCRBV9S1A1TA0A576 114 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 DCDC2BA2VCK2 349 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 EME2A4GXA9 379 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 B4DGG1 531 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 KIR2DS3K7RE56 304 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 LIN7AO14910 233 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 KPNA5O15131 536 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 SNX2O60749 519 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 HAUS5O94927 633 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 KCNK5O95279 499 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 PKMP14618 531 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 TNFRSF8P28908 595 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 FMO4P31512 558 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 NOVA1P51513 510 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 DAB2P98082 770 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 MPP1Q00013 466 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 PLOD1Q02809 727 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 RPA4Q13156 261 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 KIR2DS5Q14953 304 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 CTSL3PQ5NE16 218 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 CNSTQ6PJW8 725 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 SLC26A11Q86WA9 606 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 SFTPA2Q8IWL1 248 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 SFRP1Q8N474 314 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 ARL14Q8N4G2 192 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 SLC37A2Q8TED4 501 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 NAT6Q93015 286 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 PANX3Q96QZ0 392 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 ANKZF1Q9H8Y5 726 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 COG4Q9H9E3 785 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 LATS2Q9NRM7 1088 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 NSMCE4AQ9NXX6 385 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 ZFATQ9P243 1243 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 PCDHGA1Q9Y5H4 931 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 COMMD10Q9Y6G5 202 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 HEATR5BQ9P2D3 2071 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 SPTBN2O15020 2390 aa11.67□□□□□ -0.54
PDLIM5-208ENST00000504489 SLC5A10A0PJK1 596 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 FAM159BA6NKW6 160 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 IQCF5A8MTL0 148 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 PDZK1P1A8MUH7 402 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 GIPC1O14908 333 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 NUDT21O43809 227 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 C1QAP02745 245 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 AHSGP02765 367 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 MYF5P13349 255 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 BRAFP15056 766 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 PNLIPP16233 465 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 GLB1P16278 677 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 XRCC1P18887 633 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 RPL10P27635 214 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 AOAHP28039 575 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 GABRB3P28472 473 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 CCR7P32248 378 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 HALP42357 657 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 ID4P47928 161 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 FASLGP48023 281 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 ACADVLP49748 655 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 MAZP56270 477 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 ILF2Q12905 390 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 DNAJC3Q13217 504 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 ILKQ13418 452 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 SLMAPQ14BN4 828 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 KYNUQ16719 465 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 CAPRIN2Q6IMN6 1127 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 ZNF549Q6P9A3 640 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 CAPN12Q6ZSI9 719 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 KRT222Q8N1A0 295 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 AVL9Q8NBF6 648 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 MAPK15Q8TD08 544 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 ASZ1Q8WWH4 475 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 PATE1Q8WXA2 126 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 ELMO1Q92556 727 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 CDKL2Q92772 493 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 OR52A5Q9H2C5 316 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 CCDC68Q9H2F9 335 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 TOR4AQ9NXH8 423 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 NINJ2Q9NZG7 142 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 CORO1CQ9ULV4 474 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 WDR37Q9Y2I8 494 aa11.66□□□□□ -0.54
PDLIM5-208ENST00000504489 SPAARA0A1B0GVQ0 90 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 NIPSNAP2O75323 286 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 GPC4O75487 556 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 DKK1O94907 266 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 TRIM16O95361 564 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 APOA4P06727 396 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 GP1BAP07359 652 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 F7P08709 466 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 SLC35G4P0C7Q5 338 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 CDK4P11802 303 aa11.65□□□□□ -0.54
PDLIM5-208ENST00000504489 ITGB6P18564 788 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms