RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 PSMD13Q9UNM6 376 aa17.83■□□□□ 0.44
DDR1-252ENST00000504152 APOBEC2Q9Y235 224 aaKnown RBP17.83■□□□□ 0.44
DDR1-252ENST00000504152 GOLGA4Q13439 2230 aaKnown RBP17.82■□□□□ 0.44
DDR1-252ENST00000504152 LY6G6EA0A0G2JKS1 128 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 SPAARA0A1B0GVQ0 90 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 RHPN2P1A8MT19 583 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 ZW10O43264 779 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 NUDT21O43809 227 aaKnown RBP17.82■□□□□ 0.44
DDR1-252ENST00000504152 APOA4P06727 396 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 SLC35G4P0C7Q5 338 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 CDK4P11802 303 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 AOAHP28039 575 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 CCR7P32248 378 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 ILKQ13418 452 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 BRD3Q15059 726 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 SYTL3Q4VX76 610 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 CTSL3PQ5NE16 218 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 CCNI2Q6ZMN8 369 aaPredicted RBP17.82■□□□□ 0.44
DDR1-252ENST00000504152 OTOAQ7RTW8 1153 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 EFL1Q7Z2Z2 1120 aaKnown RBP17.82■□□□□ 0.44
DDR1-252ENST00000504152 STRA8Q7Z7C7 330 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 SFTPA2Q8IWL1 248 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 SLC37A2Q8TED4 501 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 FBF1Q8TES7 1133 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 PATE1Q8WXA2 126 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 TMEM159Q96B96 161 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 SH3KBP1Q96B97 665 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 WWP1Q9H0M0 922 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 ANKZF1Q9H8Y5 726 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 LATS2Q9NRM7 1088 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 NINJ2Q9NZG7 142 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 TXNDC16Q9P2K2 825 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 WDR37Q9Y2I8 494 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 PCDHGA1Q9Y5H4 931 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 U3KQA8 63 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 CEP250Q9BV73 2442 aa17.82■□□□□ 0.44
DDR1-252ENST00000504152 SLC5A10A0PJK1 596 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 FAM159BA6NKW6 160 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 GIPC1O14908 333 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 VIPP01282 170 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 GP1BAP07359 652 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 BRAFP15056 766 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 PNLIPP16233 465 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 GABRB3P28472 473 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 TNFRSF8P28908 595 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 CD151P48509 253 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 MAZP56270 477 aaKnown RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 E2F1Q01094 437 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 HSPA14Q0VDF9 509 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 BOP1Q14137 746 aaKnown RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 CLCA4Q14CN2 919 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 TMED2Q15363 201 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 ZNF658BQ4V348 819 aaPredicted RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 CAPRIN2Q6IMN6 1127 aaKnown RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 GUSBP11Q6P575 273 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 TRIM48Q8IWZ4 208 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 CTAGE3PQ8IX95 158 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 LILRA3Q8N6C8 439 aaPredicted RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 IFI44Q8TCB0 444 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 CXorf40BQ96DE9 158 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 CDC42EP4Q9H3Q1 356 aaKnown RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 SARS2Q9NP81 518 aaKnown RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 SCHIP1Q9P0W5 487 aaPredicted RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 CPNE7Q9UBL6 633 aa17.81■□□□□ 0.44
DDR1-252ENST00000504152 CORO1CQ9ULV4 474 aaPredicted RBP17.81■□□□□ 0.44
DDR1-252ENST00000504152 IFRD1O00458 451 aaPredicted RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 PPM1DO15297 605 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 NIPSNAP2O75323 286 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 F7P08709 466 aaPredicted RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 KCNA4P22459 653 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 MCM3P25205 808 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 SLC19A1P41440 591 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 SKIV2L2P42285 1042 aaKnown RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 FASLGP48023 281 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 ACADVLP49748 655 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 CSE1LP55060 971 aaKnown RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 HHEXQ03014 270 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 KRT33BQ14525 404 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 RPE65Q16518 533 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 CCDC157Q569K6 752 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 PLEKHS1Q5SXH7 462 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 UGT3A1Q6NUS8 523 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 ZNF549Q6P9A3 640 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 NAPRTQ6XQN6 538 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 TRMT10CQ7L0Y3 403 aaKnown RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 INSM2Q96T92 566 aaPredicted RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 AARSD1Q9BTE6 412 aaKnown RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 ABCG4Q9H172 646 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 SMYD2Q9NRG4 433 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 ZNF624Q9P2J8 865 aaPredicted RBP17.8■□□□□ 0.44
DDR1-252ENST00000504152 KLHL42Q9P2K6 505 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 SLC17A6Q9P2U8 582 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 HEBP2Q9Y5Z4 205 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 RNF215Q9Y6U7 377 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 COLEC10Q9Y6Z7 277 aa17.8■□□□□ 0.44
DDR1-252ENST00000504152 OR52A4PA6NMU1 304 aa17.79■□□□□ 0.44
DDR1-252ENST00000504152 CXorf49A8MYA2 514 aaPredicted RBP17.79■□□□□ 0.44
DDR1-252ENST00000504152 VPS26AO75436 327 aa17.79■□□□□ 0.44
DDR1-252ENST00000504152 GPC4O75487 556 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms