RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 LZTS3O60299 673 aaPredicted RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 GPC4O75487 556 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 UROSP10746 265 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 P2RY2P41231 377 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 FOXA1P55317 472 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 DPTQ07507 201 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 HSPA14Q0VDF9 509 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 HTR4Q13639 388 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 HERC3Q15034 1050 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 PHKG1Q16816 387 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 GPRIN3Q6ZVF9 776 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 LARP4Q71RC2 724 aaKnown RBP eCLIP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 SYVN1Q86TM6 617 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 CHPFQ8IZ52 775 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 FAM13CQ8NE31 585 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 RP9Q8TA86 221 aaKnown RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 CXorf40AQ8TE69 158 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 ELMO1Q92556 727 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 DLG3Q92796 817 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 GUCD1Q96NT3 240 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 LENG8Q96PV6 779 aaPredicted RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 EGFL8Q99944 293 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 P2RY13Q9BPV8 354 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 UBE2ZQ9H832 354 aaPredicted RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 ZDHHC4Q9NPG8 344 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 G3BP2Q9UN86 482 aaKnown RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 COQ6Q9Y2Z9 468 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 ASB1Q9Y576 335 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 COPG1Q9Y678 874 aaKnown RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 PLK4O00444 970 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 UBDO15205 165 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 TAPBPO15533 448 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 MMP20O60882 483 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 RNASEH1O60930 286 aaKnown RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 VPS4BO75351 444 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 GUCA1CO95843 209 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 CHEK2O96017 543 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 CDKL1Q00532 357 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 SP140Q13342 867 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 CAMK2GQ13555 558 aaPredicted RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 TTC23LQ6PF05 361 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 PACS2Q86VP3 889 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 ZNF513Q8N8E2 541 aaPredicted RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 ASZ1Q8WWH4 475 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 ESAMQ96AP7 390 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 RHBDF1Q96CC6 855 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 SLC12A9Q9BXP2 914 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 TRIM54Q9BYV2 358 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 RSPH9Q9H1X1 276 aaPredicted RBP21.6■■□□□ 1.05
PTPN13-205ENST00000502971 EPHX3Q9H6B9 360 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 PFDN4Q9NQP4 134 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 FADS3Q9Y5Q0 445 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 BRWD1Q9NSI6 2320 aa21.6■■□□□ 1.05
PTPN13-205ENST00000502971 ANTXRLA6NF34 631 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 PGM1P36871 562 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 SOX9P48436 509 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 PRLHRP49683 370 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 CNTN1Q12860 1018 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 TMEM115Q12893 351 aaPredicted RBP21.59■■□□□ 1.05
PTPN13-205ENST00000502971 GTF2H2Q13888 395 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 BOP1Q14137 746 aaKnown RBP21.59■■□□□ 1.05
PTPN13-205ENST00000502971 SQLEQ14534 574 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 GTF2H2CQ6P1K8 395 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 GOLGA7Q7Z5G4 137 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 CHCHD4Q8N4Q1 142 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 RASGEF1AQ8N9B8 481 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 FBXO27Q8NI29 283 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 KCNA7Q96RP8 456 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 CCT7Q99832 543 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 RTKNQ9BST9 563 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 ZCCHC2Q9C0B9 1178 aaKnown RBP21.59■■□□□ 1.05
PTPN13-205ENST00000502971 WWOXQ9NZC7 414 aa21.59■■□□□ 1.05
PTPN13-205ENST00000502971 CNOT6Q9ULM6 557 aaKnown RBP21.59■■□□□ 1.05
PTPN13-205ENST00000502971 LOC100653049A0A140TA62 436 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 A0A1B0GTL3 188 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 PIP5K1BO14986 540 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 ATG13O75143 517 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 KRT34O76011 436 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 ATP6V1G2O95670 118 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 SOD1P00441 154 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 ANXA5P08758 320 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 CPOXP36551 454 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 ATP4BP51164 291 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 SMAD4Q13485 552 aaKnown RBP21.58■■□□□ 1.05
PTPN13-205ENST00000502971 ZNF648Q5T619 568 aaPredicted RBP21.58■■□□□ 1.05
PTPN13-205ENST00000502971 PIP5KL1Q5T9C9 394 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 UBE2R2Q712K3 238 aaPredicted RBP21.58■■□□□ 1.05
PTPN13-205ENST00000502971 TCAIMQ8N3R3 496 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 ASB11Q8WXH4 323 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 CD244Q9BZW8 370 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 NOL11Q9H8H0 719 aaKnown RBP21.58■■□□□ 1.05
PTPN13-205ENST00000502971 PARVBQ9HBI1 364 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 ZNF225Q9UK10 706 aa21.58■■□□□ 1.05
PTPN13-205ENST00000502971 XIRP2A4UGR9 3374 aa21.58■■□□□ 1.04
PTPN13-205ENST00000502971 OR2AG2A6NM03 316 aa21.58■■□□□ 1.04
PTPN13-205ENST00000502971 H3BQ06 376 aaPredicted RBP21.58■■□□□ 1.04
PTPN13-205ENST00000502971 K7EQS6 105 aa21.58■■□□□ 1.04
PTPN13-205ENST00000502971 WFS1O76024 890 aa21.58■■□□□ 1.04
PTPN13-205ENST00000502971 SLCO2B1O94956 709 aa21.58■■□□□ 1.04
PTPN13-205ENST00000502971 ADH1BP00325 375 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms