RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ZNF385CQ66K41 422 aaPredicted RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 TMEM220Q6QAJ8 160 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 RANBP10Q6VN20 620 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 FAM83HQ6ZRV2 1179 aaPredicted RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 FAM92BQ6ZTR7 304 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 GLT6D1Q7Z4J2 308 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 LURAP1LQ8IV03 231 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 KATNAL2Q8IYT4 538 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ACVR1CQ8NER5 493 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 GPR150Q8NGU9 434 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 SPATA22Q8NHS9 363 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF398Q8TD17 642 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 SSC4DQ8WTU2 575 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 P3H4Q92791 437 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ULK4Q96C45 1275 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 BARD1Q99728 777 aaKnown RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 MAP3K3Q99759 626 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 FERMT1Q9BQL6 677 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 PACSIN1Q9BY11 444 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 TRIM55Q9BYV6 548 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC29A3Q9BZD2 475 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ING2Q9H160 280 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ARNT2Q9HBZ2 717 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ACSS2Q9NR19 701 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNHIT6Q9NWK9 470 aaKnown RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 POMT2Q9UKY4 750 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 TCFL5Q9UL49 500 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 AAR2Q9Y312 384 aaKnown RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 USP9XQ93008 2570 aaPredicted RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ICE1Q9Y2F5 2266 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 NBPF19A0A087WUL8 3843 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 FER1L5A0AVI2 2057 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 TRBV5-4A0A0C4DH59 114 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 BLACEA4D250 179 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC9B1P1A6NJY1 282 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 C2orf81A6NN90 581 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 GOLGA6L19H0YKK7 550 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 APOC4-APOC2K7ER74 178 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 QSOX1O00391 747 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 STX7O15400 261 aaKnown RBP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 MAP3K7O43318 606 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 CBFA2T2O43439 604 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SGTAO43765 313 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 AKR1B10O60218 316 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 CST8O60676 142 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 MTX2O75431 263 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PMPCBO75439 489 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 KATNA1O75449 491 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SRP72O76094 671 aaKnown RBP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 TMEM63AO94886 807 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ZRANB2O95218 330 aaKnown RBP eCLIP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 LCA5LO95447 670 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PRAMEF1O95521 474 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 CRTAMO95727 393 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ONECUT2O95948 504 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 APOC2P02655 101 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC35G4P0C7Q5 338 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PIRTP0C851 137 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 EBLN1P0CF75 366 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 RALBP11234 206 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 NFKB1P19838 968 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 MSH3P20585 1137 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PSMA3P25788 255 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PTPN7P35236 360 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ADRA1AP35348 466 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 GJC1P36383 396 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ARL4DP49703 201 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 KPNA2P52292 529 aaKnown RBP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 VAV2P52735 878 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PPP1CAP62136 330 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 XIAPP98170 497 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PRKAA1Q13131 559 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 GPS2Q13227 327 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 IL10RAQ13651 578 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SSPNQ14714 243 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PLA2G4EQ3MJ16 856 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 C4orf17Q53FE4 359 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ODF2Q5BJF6 829 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ITPRIPL1Q6GPH6 555 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ARMC6Q6NXE6 501 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 JMJD6Q6NYC1 403 aaPredicted RBP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 MFSD7Q6UXD7 560 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SNX20Q7Z614 316 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 LUZP1Q86V48 1076 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 CPNE8Q86YQ8 564 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 RFX6Q8HWS3 928 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 TMEM126BQ8IUX1 230 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 RCOR2Q8IZ40 523 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF567Q8N184 647 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC38A9Q8NBW4 561 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 GDAP1Q8TB36 358 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 HM13Q8TCT9 377 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 PROKR1Q8TCW9 393 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 COG1Q8WTW3 980 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 CPLX3Q8WVH0 158 aa5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 OXNAD1Q96HP4 312 aaPredicted RBP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 RBM41Q96IZ5 413 aaKnown RBP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 QKIQ96PU8 341 aaKnown RBP eCLIP5.94□□□□□ -1.46
LSM3P4-201ENST00000502948 GBA3Q9H227 469 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms