RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 IQCF5A8MTL0 148 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 CASC3O15234 703 aaKnown RBP24.58■■□□□ 1.53
LSM6-202ENST00000502781 EIF3BP55884 814 aaKnown RBP24.58■■□□□ 1.53
LSM6-202ENST00000502781 RPE65Q16518 533 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 CDCP2Q5VXM1 449 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 TMPRSS7Q7RTY8 843 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 GALNT7Q86SF2 657 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 CACTIN-AS1Q8N1I8 211 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 WDR48Q8TAF3 677 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 GSDMBQ8TAX9 411 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 PYROXD1Q8WU10 500 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 ELMO1Q92556 727 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 RMDN2Q96LZ7 410 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 WWP1Q9H0M0 922 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 UCK1Q9HA47 277 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 IARS2Q9NSE4 1012 aaKnown RBP24.58■■□□□ 1.53
LSM6-202ENST00000502781 B4GAT1O43505 415 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 PDHA2P29803 388 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 CCR7P32248 378 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 LEPRP48357 1165 aaKnown RBP24.57■■□□□ 1.52
LSM6-202ENST00000502781 PLOD1Q02809 727 aaPredicted RBP24.57■■□□□ 1.52
LSM6-202ENST00000502781 FOXC1Q12948 553 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 TEDDM1Q5T9Z0 273 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 PTRHD1Q6GMV3 140 aaKnown RBP24.57■■□□□ 1.52
LSM6-202ENST00000502781 TMPRSS12Q86WS5 348 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 SPDYE1Q8NFV5 336 aaPredicted RBP24.57■■□□□ 1.52
LSM6-202ENST00000502781 SH3KBP1Q96B97 665 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 INSM2Q96T92 566 aaPredicted RBP24.57■■□□□ 1.52
LSM6-202ENST00000502781 TSSK1BQ9BXA7 367 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 STN1Q9H668 368 aaKnown RBP24.57■■□□□ 1.52
LSM6-202ENST00000502781 SLC40A1Q9NP59 571 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 FBXO6Q9NRD1 293 aaPredicted RBP24.57■■□□□ 1.52
LSM6-202ENST00000502781 CRYL1Q9Y2S2 319 aa24.57■■□□□ 1.52
LSM6-202ENST00000502781 FAM221BA6H8Z2 402 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 H3BMM5 538 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 HYAL3O43820 417 aaPredicted RBP24.56■■□□□ 1.52
LSM6-202ENST00000502781 GPC4O75487 556 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 TOP3BO95985 862 aaKnown RBP24.56■■□□□ 1.52
LSM6-202ENST00000502781 SLC35G4P0C7Q5 338 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 AOAHP28039 575 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 ECHS1P30084 290 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 FMO4P31512 558 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 CD151P48509 253 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 BIRC2Q13490 618 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 KIAA0408Q6ZU52 694 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 RBM12BQ8IXT5 1001 aaKnown RBP24.56■■□□□ 1.52
LSM6-202ENST00000502781 GABPB2Q8TAK5 448 aaPredicted RBP24.56■■□□□ 1.52
LSM6-202ENST00000502781 PANX3Q96QZ0 392 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 ABCG4Q9H172 646 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 LRRN3Q9H3W5 708 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 CDYLQ9Y232 598 aa24.56■■□□□ 1.52
LSM6-202ENST00000502781 LILRA5A6NI73 299 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 TCEA3O75764 348 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 HAUS5O94927 633 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 VIPP01282 170 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 F7P08709 466 aaPredicted RBP24.55■■□□□ 1.52
LSM6-202ENST00000502781 MTHFD1P11586 935 aaKnown RBP24.55■■□□□ 1.52
LSM6-202ENST00000502781 PKMP14618 531 aaKnown RBP24.55■■□□□ 1.52
LSM6-202ENST00000502781 GABRB3P28472 473 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 PREPP48147 710 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 CLDN6P56747 220 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 CCL7P80098 99 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 MPP1Q00013 466 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 SQSTM1Q13501 440 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 DNTTIP2Q5QJE6 756 aaKnown RBP24.55■■□□□ 1.52
LSM6-202ENST00000502781 HES3Q5TGS1 186 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 ZNF549Q6P9A3 640 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 CYS1Q717R9 158 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 KRT222Q8N1A0 295 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 GALNT15Q8N3T1 639 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 CXorf40BQ96DE9 158 aa24.55■■□□□ 1.52
LSM6-202ENST00000502781 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.55■■□□□ 1.52
LSM6-202ENST00000502781 IGHV1OR21-1A0A087WYE8 117 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 PRAMEF33A0A0G2JMD5 474 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 RPLP0P05388 317 aaKnown RBP24.54■■□□□ 1.52
LSM6-202ENST00000502781 ITGB6P18564 788 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 DEKP35659 375 aaKnown RBP24.54■■□□□ 1.52
LSM6-202ENST00000502781 MAGEA4P43358 317 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 CARSP49589 748 aaKnown RBP24.54■■□□□ 1.52
LSM6-202ENST00000502781 OR1D5P58170 312 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 SHC2P98077 582 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 BOP1Q14137 746 aaKnown RBP24.54■■□□□ 1.52
LSM6-202ENST00000502781 ZNF449Q6P9G9 518 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 NAPRTQ6XQN6 538 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 TMEM26Q6ZUK4 368 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 PDZD3Q86UT5 571 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 DCBLD1Q8N8Z6 715 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 Q8N9G6 341 aaPredicted RBP24.54■■□□□ 1.52
LSM6-202ENST00000502781 ASZ1Q8WWH4 475 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 C12orf66Q96MD2 445 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 LATS2Q9NRM7 1088 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 MED16Q9Y2X0 877 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 ZW10O43264 779 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 SLCO2B1O94956 709 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 MT-CO3P00414 261 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 GSTA2P09210 222 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 ACADLP28330 430 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 CD1CP29017 333 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 ALDH4A1P30038 563 aa24.54■■□□□ 1.52
LSM6-202ENST00000502781 SSTR1P30872 391 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms