RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SLC30A1Q9Y6M5 507 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 DLEC1Q9Y238 1755 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 UBN2Q6ZU65 1347 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 C2orf92A0A1B0GVN3 265 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 A0A1B0GWJ7 208 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 MYADML2A6NDP7 307 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 C5orf52A6NGY3 159 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 NPIPB11E5RHQ5 1161 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 E7ENX8 843 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 KIF2AO00139 706 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 TTI1O43156 1089 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SEC14L5O43304 696 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 HBP1O60381 514 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 DAB1O75553 588 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SCGB2A1O75556 95 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 CBX6O95503 412 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ADAP00813 363 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 GH1P01241 217 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 IL1AP01583 271 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ALDOAP04075 364 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 LCATP04180 440 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SERPING1P05155 500 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 PCCBP05166 539 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 AREGP15514 252 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 PFKFB1P16118 471 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 GNAZP19086 355 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ANXA7P20073 488 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ITGAXP20702 1163 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 COMTP21964 271 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 GPTP24298 496 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 DNAJB1P25685 340 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 CCND2P30279 289 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 CDC25CP30307 473 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 PPIFP30405 207 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 APOBEC3AP31941 199 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 RFC4P35249 363 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 CDKN1AP38936 164 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 FRKP42685 505 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 PTGER3P43115 390 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 CENPAP49450 140 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SERPINH1P50454 418 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ANXA11P50995 505 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 RPS7P62081 194 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SHC2P98077 582 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 TAP2Q03519 686 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 GAD2Q05329 585 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 IL24Q13007 206 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SPP2Q13103 211 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 HLFQ16534 295 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 VWC2Q2TAL6 325 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 EDRF1Q3B7T1 1238 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 PCGF3Q3KNV8 242 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 FUT11Q495W5 492 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 EPC2Q52LR7 807 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 IFI44LQ53G44 452 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 FASTKD1Q53R41 847 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 HERC4Q5GLZ8 1057 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 RNASEH2BQ5TBB1 312 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 TBC1D9BQ66K14 1250 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 RAET1GQ6H3X3 334 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SULT1C3Q6IMI6 304 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 PRR5LQ6MZQ0 368 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 TCTN3Q6NUS6 607 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 TEX38Q6PEX7 206 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 IL20RBQ6UXL0 311 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 LRIG3Q6UXM1 1119 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZBTB49Q6ZSB9 765 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ADAMTSL2Q86TH1 951 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 KRTAP1-3Q8IUG1 177 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 MAPKAPK5Q8IW41 473 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF595Q8IYB9 648 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 LRRC56Q8IYG6 542 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 FUKQ8N0W3 1084 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 L3MBTL4Q8NA19 623 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 CLEC1AQ8NC01 280 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR10S1Q8NGN2 331 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 NCOA7Q8NI08 942 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 GANCQ8TET4 914 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SGCDQ92629 289 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARSGQ96EG1 525 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 WDYHV1Q96HA8 205 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 CNOT6LQ96LI5 555 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 MNTQ99583 582 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZSWIM1Q9BR11 485 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF577Q9BSK1 485 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZSCAN5AQ9BUG6 496 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 C1QTNF5Q9BXJ0 243 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 NFKBIZQ9BYH8 718 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 RAB33BQ9H082 229 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 TMEM117Q9H0C3 514 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 TKTL2Q9H0I9 626 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 MMP27Q9H306 513 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 PLEKHA4Q9H4M7 779 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 SUDS3Q9H7L9 328 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 RPF1Q9H9Y2 349 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNHIT6Q9NWK9 470 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 HYPKQ9NX55 129 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 HSFX1Q9UBD0 423 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 UPB1Q9UBR1 384 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 KCNE5Q9UJ90 142 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms