RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 SMOXQ9NWM0 555 aa18.11■□□□□ 0.49
PRKCB-209ENST00000498058 PADI1Q9ULC6 663 aa18.11■□□□□ 0.49
PRKCB-209ENST00000498058 PCDHGA6Q9Y5G7 932 aa18.11■□□□□ 0.49
PRKCB-209ENST00000498058 DNMT3AQ9Y6K1 912 aaPredicted RBP18.11■□□□□ 0.49
PRKCB-209ENST00000498058 CREG1O75629 220 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 ZRANB2O95218 330 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRKCB-209ENST00000498058 NTRK1P04629 796 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 MTHFD1P11586 935 aaKnown RBP18.1■□□□□ 0.49
PRKCB-209ENST00000498058 RPS18P62269 152 aaKnown RBP18.1■□□□□ 0.49
PRKCB-209ENST00000498058 TUBB3Q13509 450 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 LAMB3Q13751 1172 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 PEX26Q7Z412 305 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 RCOR2Q8IZ40 523 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 UBXN4Q92575 508 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 VAT1Q99536 393 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 NRTNQ99748 197 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 APOL2Q9BQE5 337 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 TRIM55Q9BYV6 548 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 IMP3Q9NV31 184 aaKnown RBP18.1■□□□□ 0.49
PRKCB-209ENST00000498058 RSPH14Q9UHP6 348 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 FKBPLQ9UIM3 349 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 TLK1Q9UKI8 766 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 AMFRQ9UKV5 643 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 RARRES3Q9UL19 164 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 PLAAQ9Y263 795 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRKCB-209ENST00000498058 PCDHB3Q9Y5E6 796 aa18.1■□□□□ 0.49
PRKCB-209ENST00000498058 GRID2IPA4D2P6 1211 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 CLEC18AA5D8T8 446 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 OR5K3A6NET4 321 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 MTSS1O43312 755 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 DNAJB5O75953 348 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 ADRA1AP35348 466 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 ARCN1P48444 511 aaKnown RBP18.09■□□□□ 0.49
PRKCB-209ENST00000498058 XIAPP98170 497 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 ITGA9Q13797 1035 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 CLEC18BQ6UXF7 455 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 RANBP10Q6VN20 620 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 BBS12Q6ZW61 710 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 LRRC57Q8N9N7 239 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 CLEC18CQ8NCF0 446 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 OR4K2Q8NGD2 314 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 RMDN2Q96LZ7 410 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 ZCCHC2Q9C0B9 1178 aaKnown RBP18.09■□□□□ 0.49
PRKCB-209ENST00000498058 TWSG1Q9GZX9 223 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 GBA3Q9H227 469 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.09■□□□□ 0.49
PRKCB-209ENST00000498058 FAM8A1Q9UBU6 413 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 POLHQ9Y253 713 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 PKP3Q9Y446 797 aa18.09■□□□□ 0.49
PRKCB-209ENST00000498058 PIPSLA2A3N6 862 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 MGAT4DA6NG13 374 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 USP27XA6NNY8 438 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 MIF4GDA9UHW6 222 aaKnown RBP18.08■□□□□ 0.48
PRKCB-209ENST00000498058 HACD1B0YJ81 288 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 STX7O15400 261 aaKnown RBP18.08■□□□□ 0.48
PRKCB-209ENST00000498058 DDX3YO15523 660 aaKnown RBP18.08■□□□□ 0.48
PRKCB-209ENST00000498058 PRAMEF1O95521 474 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 CCNYL3P0C7X3 344 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 KPNA2P52292 529 aaKnown RBP18.08■□□□□ 0.48
PRKCB-209ENST00000498058 SEPT6Q14141 434 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 PLCL1Q15111 1095 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 GPR19Q15760 415 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 PRAMEF17Q5VTA0 474 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 CCDC50Q8IVM0 306 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 D2HGDHQ8N465 521 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 UBL4BQ8N7F7 174 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 SLC38A9Q8NBW4 561 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 OR2L2Q8NH16 312 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 ZNF514Q96K75 400 aaPredicted RBP18.08■□□□□ 0.48
PRKCB-209ENST00000498058 C12orf66Q96MD2 445 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 FAM118BQ9BPY3 351 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 ACTL8Q9H568 366 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 PDE7BQ9NP56 450 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 FGF21Q9NSA1 209 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 HRASLS2Q9NWW9 162 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 ANKMY1Q9P2S6 941 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 SLC24A2Q9UI40 661 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 KCND3Q9UK17 655 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 TRHDEQ9UKU6 1024 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 CAPN6Q9Y6Q1 641 aa18.08■□□□□ 0.48
PRKCB-209ENST00000498058 TLCD2A6NGC4 264 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 H7C0C1 242 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 SRP72O76094 671 aaKnown RBP18.07■□□□□ 0.48
PRKCB-209ENST00000498058 MSH3P20585 1137 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 LPOP22079 712 aaPredicted RBP18.07■□□□□ 0.48
PRKCB-209ENST00000498058 PSMB4P28070 264 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 AKT1P31749 480 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 ATP5OP48047 213 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 PMS2P54278 862 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 KLRB1Q12918 225 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 XRCC4Q13426 336 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 UBAP2LQ14157 1087 aaKnown RBP18.07■□□□□ 0.48
PRKCB-209ENST00000498058 TAF1AQ15573 450 aaPredicted RBP18.07■□□□□ 0.48
PRKCB-209ENST00000498058 LONRF2Q1L5Z9 754 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 DNTTIP2Q5QJE6 756 aaKnown RBP18.07■□□□□ 0.48
PRKCB-209ENST00000498058 CAPRIN2Q6IMN6 1127 aaKnown RBP18.07■□□□□ 0.48
PRKCB-209ENST00000498058 LCN10Q6JVE6 187 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 TCTN3Q6NUS6 607 aa18.07■□□□□ 0.48
PRKCB-209ENST00000498058 OR13C4Q8NGS5 318 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms