RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 NCAPGQ9BPX3 1015 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 TRIM55Q9BYV6 548 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 ULBP3Q9BZM4 244 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 APMAPQ9HDC9 416 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 SLC6A20Q9NP91 592 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 SLAMF7Q9NQ25 335 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS45-210ENST00000497638 NPFFR2Q9Y5X5 522 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 PKDREJQ9NTG1 2253 aa7.52□□□□□ -1.21
VPS45-210ENST00000497638 AKAP9Q99996 3911 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 ARHGAP10A1A4S6 786 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 PIPSLA2A3N6 862 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 HEATR9A2RTY3 570 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 A8MU76 341 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 BUB1O43683 1085 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 KDELR3O43731 214 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 RAMP2O60895 175 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 KATNA1O75449 491 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 ERBB2P04626 1255 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 ANKRD34CP0C6C1 535 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 ELFN1P0C7U0 828 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 AK4P27144 223 aaPredicted RBP7.51□□□□□ -1.21
VPS45-210ENST00000497638 CASP14P31944 242 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 GARSP41250 739 aaKnown RBP7.51□□□□□ -1.21
VPS45-210ENST00000497638 MAP4K2Q12851 820 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 DNASE1L3Q13609 305 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 CHRNA6Q15825 494 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 SLC25A52Q3SY17 297 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 INO80DQ53TQ3 878 aaPredicted RBP7.51□□□□□ -1.21
VPS45-210ENST00000497638 JMJD6Q6NYC1 403 aaPredicted RBP7.51□□□□□ -1.21
VPS45-210ENST00000497638 PNCKQ6P2M8 343 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 TMEM135Q86UB9 458 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 SLC47A2Q86VL8 602 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 Q8NA96 180 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 THAP4Q8WY91 577 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 PNPLA2Q96AD5 504 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 STAMBPL1Q96FJ0 436 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 ZNF641Q96N77 438 aaPredicted RBP7.51□□□□□ -1.21
VPS45-210ENST00000497638 TBCBQ99426 244 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 UNKQ9C0B0 810 aaKnown RBP7.51□□□□□ -1.21
VPS45-210ENST00000497638 SYNCQ9H7C4 482 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 PHPT1Q9NRX4 125 aaPredicted RBP7.51□□□□□ -1.21
VPS45-210ENST00000497638 SIDT1Q9NXL6 827 aaKnown RBP7.51□□□□□ -1.21
VPS45-210ENST00000497638 HPSEQ9Y251 543 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 TCAF1Q9Y4C2 921 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 CSMD2Q7Z408 3487 aa7.51□□□□□ -1.21
VPS45-210ENST00000497638 A0A1B0GVL5 298 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 C21orf140B9A014 251 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 TEX33O43247 280 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 PIGNO95427 931 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 CBX6O95503 412 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 CMA1P23946 247 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 NFKBIAP25963 317 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 ACTR1BP42025 376 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 GNPDA1P46926 289 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 PER3P56645 1201 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 ACTR1AP61163 376 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 LRRC63Q05C16 580 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 RALGDSQ12967 914 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 CDSNQ15517 529 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 PTPN20Q4JDL3 420 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 COBLL1Q53SF7 1204 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 MANEALQ5VSG8 457 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 LEKR1Q6ZMV7 388 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 ENOSF1Q7L5Y1 443 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 NLRP14Q86W24 1093 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 DNAAF5Q86Y56 855 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 MCEMP1Q8IX19 187 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 WDTC1Q8N5D0 677 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 TUBGCP5Q96RT8 1024 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 FRMD8Q9BZ67 464 aaPredicted RBP7.5□□□□□ -1.21
VPS45-210ENST00000497638 GTPBP4Q9BZE4 634 aaKnown RBP7.5□□□□□ -1.21
VPS45-210ENST00000497638 SCAND2PQ9GZW5 306 aaPredicted RBP7.5□□□□□ -1.21
VPS45-210ENST00000497638 STN1Q9H668 368 aaKnown RBP7.5□□□□□ -1.21
VPS45-210ENST00000497638 SUDS3Q9H7L9 328 aaPredicted RBP7.5□□□□□ -1.21
VPS45-210ENST00000497638 ACSS2Q9NR19 701 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 DLL4Q9NR61 685 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 TMEM248Q9NWD8 314 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 KCTD5Q9NXV2 234 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 CFAP45Q9UL16 551 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 SUFUQ9UMX1 484 aa7.5□□□□□ -1.21
VPS45-210ENST00000497638 G3BP2Q9UN86 482 aaKnown RBP7.5□□□□□ -1.21
VPS45-210ENST00000497638 MN1Q10571 1320 aaPredicted RBP7.5□□□□□ -1.21
VPS45-210ENST00000497638 GOLGA6L3A6NEY3 463 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 ANKUB1A6NFN9 424 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 INSIG1O15503 277 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 MT-ND3P03897 115 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 IVLP07476 585 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 ADCY8P40145 1251 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 SYKP43405 635 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 NDST2P52849 883 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 RNASE9P60153 205 aaKnown RBP7.49□□□□□ -1.21
VPS45-210ENST00000497638 FOXM1Q08050 763 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 IL11RAQ14626 422 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 UGT8Q16880 541 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 CCDC40Q4G0X9 1142 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.49□□□□□ -1.21
VPS45-210ENST00000497638 AFMIDQ63HM1 303 aa7.49□□□□□ -1.21
VPS45-210ENST00000497638 RWDD4Q6NW29 188 aaKnown RBP7.49□□□□□ -1.21
VPS45-210ENST00000497638 DPPA4Q7L190 304 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms