RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 PRSS56P0CW18 603 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 MTHFD1P11586 935 aaKnown RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 IVDP26440 423 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 NDUFS1P28331 727 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 LSSP48449 732 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 DRG2P55039 364 aaKnown RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 CKAP4Q07065 602 aaKnown RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 TRA2AQ13595 282 aaKnown RBP eCLIP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 CLCA4Q14CN2 919 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 RPE65Q16518 533 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 KCTD19Q17RG1 926 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 AMZ1Q400G9 498 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 DNAJC21Q5F1R6 531 aaKnown RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 WDR74Q6RFH5 385 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 IGF2-ASQ6U949 168 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 FAM83HQ6ZRV2 1179 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 TMEM26Q6ZUK4 368 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 ZNF572Q7Z3I7 529 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 MARCH9Q86YJ5 346 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 LMNTD2Q8IXW0 634 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 CFAP206Q8IYR0 622 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 BBOF1Q8ND07 529 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 GPR150Q8NGU9 434 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 WDR36Q8NI36 951 aaKnown RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 CCDC97Q96F63 343 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 ATXN7L3BQ96GX2 97 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 SNF8Q96H20 258 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 C16orf45Q96MC5 204 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 KRT12Q99456 494 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 COG4Q9H9E3 785 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 AKAP7Q9P0M2 348 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-254ENST00000497377 WDR37Q9Y2I8 494 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 PCDHB1Q9Y5F3 818 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 PCDHGA8Q9Y5G5 932 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 FREM2Q5SZK8 3169 aa11.22□□□□□ -0.61
HLA-B-254ENST00000497377 OR52A4PA6NMU1 304 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 IFRD1O00458 451 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 PRMT5O14744 637 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 HGSO14964 777 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 TTI1O43156 1089 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 NDUFS3O75489 264 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 TTC4O95801 387 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 POLBP06746 335 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 OGNP20774 298 aaKnown RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 ARNTP27540 789 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 ARCN1P48444 511 aaKnown RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 CD151P48509 253 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 PDX1P52945 283 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 TUBB2AQ13885 445 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 TYSND1Q2T9J0 566 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 ZNF658BQ4V348 819 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 ZNF787Q6DD87 383 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 CAPRIN2Q6IMN6 1127 aaKnown RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 TMEM71Q6P5X7 295 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 KLHL35Q6PF15 583 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 USP53Q70EK8 1073 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 PLXDC1Q8IUK5 500 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 SLITRK4Q8IW52 837 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 PDIK1LQ8N165 341 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 OTUD6BQ8N6M0 293 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 GABPB2Q8TAK5 448 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 CALML6Q8TD86 181 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 ZCCHC14Q8WYQ9 949 aaKnown RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 LRRC39Q96DD0 335 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 STAMBPL1Q96FJ0 436 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 SIGLEC10Q96LC7 697 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 C12orf66Q96MD2 445 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 TUBB2BQ9BVA1 445 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 CARD6Q9BX69 1037 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 WWP1Q9H0M0 922 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 RDH14Q9HBH5 336 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 ATXN7L1Q9ULK2 861 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-254ENST00000497377 PSMD13Q9UNM6 376 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 MAD1L1Q9Y6D9 718 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 AK5Q9Y6K8 562 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 RPS6KL1Q9Y6S9 549 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 COLEC10Q9Y6Z7 277 aa11.21□□□□□ -0.61
HLA-B-254ENST00000497377 EFCAB8A8MWE9 144 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 H3BMM5 538 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 KPNA5O15131 536 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 OR1I1O60431 355 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 UBXN7O94888 489 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 SEC31AO94979 1220 aaKnown RBP11.2□□□□□ -0.62
HLA-B-254ENST00000497377 CAPNS1P04632 268 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 PGAM1P18669 254 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 RPS3P23396 243 aaKnown RBP eCLIP11.2□□□□□ -0.621e-10■■■■■ 30.2
HLA-B-254ENST00000497377 GCGRP47871 477 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 PPM1FP49593 454 aaPredicted RBP11.2□□□□□ -0.62
HLA-B-254ENST00000497377 LIMK2P53671 638 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 ADARP55265 1226 aaKnown RBP11.2□□□□□ -0.62
HLA-B-254ENST00000497377 GABREP78334 506 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 CYP4F3Q08477 520 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 THOC5Q13769 683 aaKnown RBP11.2□□□□□ -0.62
HLA-B-254ENST00000497377 GPR18Q14330 331 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 SEMA3AQ14563 771 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
HLA-B-254ENST00000497377 PHF19Q5T6S3 580 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms