RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 AFAP1Q8N556 730 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 C1orf52Q8N6N3 182 aaKnown RBP3.18□□□□□ -1.9
PHC3-216ENST00000497171 ZNF114Q8NC26 417 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 RBM15BQ8NDT2 890 aaKnown RBP3.18□□□□□ -1.9
PHC3-216ENST00000497171 THAP6Q8TBB0 222 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 WDR20Q8TBZ3 569 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 MRPS27Q92552 414 aaKnown RBP3.18□□□□□ -1.9
PHC3-216ENST00000497171 ZNF653Q96CK0 615 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 NXNL1Q96CM4 212 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 CDCA5Q96FF9 252 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 PGAP3Q96FM1 320 aaPredicted RBP3.18□□□□□ -1.9
PHC3-216ENST00000497171 OXNAD1Q96HP4 312 aaPredicted RBP3.18□□□□□ -1.9
PHC3-216ENST00000497171 FAM81BQ96LP2 452 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 GFI1Q99684 422 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 OR10A4Q9H209 315 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 PCDH9Q9HC56 1237 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 DONSONQ9NYP3 566 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 ZNF224Q9NZL3 707 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 WDR35Q9P2L0 1181 aa3.18□□□□□ -1.9
PHC3-216ENST00000497171 URADA6NGE7 173 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 PRAMEF11O60813 436 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 BMP10O95393 424 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 TRUB2O95900 331 aaKnown RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 LINC00271P0C7V0 271 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 MC5RP33032 325 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 IL15P40933 162 aaPredicted RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 PSMC4P43686 418 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 GLIPR1P48060 266 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 CTSCP53634 463 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 CSE1LP55060 971 aaKnown RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 SIRPAP78324 504 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 RELQ04864 619 aaPredicted RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 SLC20A2Q08357 652 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 SNTA1Q13424 505 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 CAMK2DQ13557 499 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 ALCAMQ13740 583 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 IL11RAQ14626 422 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 KYNUQ16719 465 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 SETMARQ53H47 684 aaPredicted RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 SPECC1Q5M775 1068 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 KRT39Q6A163 491 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 LCN10Q6JVE6 187 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 TEX38Q6PEX7 206 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 FAM47EQ6ZV65 393 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 ZNF534Q76KX8 674 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 IQCHQ86VS3 1027 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 CEP57Q86XR8 500 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 GBGT1Q8N5D6 347 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 GCSAMQ8N6F7 178 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 TC2NQ8N9U0 490 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 SLC38A9Q8NBW4 561 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 KCNH5Q8NCM2 988 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 OR52I2Q8NH67 350 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 LILRB1Q8NHL6 650 aaPredicted RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 BBS10Q8TAM1 723 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 SEMA4DQ92854 862 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 ABTB1Q969K4 478 aaPredicted RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 RMDN1Q96DB5 314 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 PRMT6Q96LA8 375 aaPredicted RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 ZMAT2Q96NC0 199 aaKnown RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 DACH2Q96NX9 599 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 FNDC11Q9BVV2 318 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 PPIL3Q9H2H8 161 aaKnown RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 DENND2DQ9H6A0 471 aaPredicted RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 OPA3Q9H6K4 179 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 TBC1D17Q9HA65 648 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 LRRC4Q9HBW1 653 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 TRMT1Q9NXH9 659 aaKnown RBP3.17□□□□□ -1.9
PHC3-216ENST00000497171 HAO2Q9NYQ3 351 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 KLHL9Q9P2J3 617 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 GIMAP2Q9UG22 337 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 ANAPC2Q9UJX6 822 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 OR2W1Q9Y3N9 320 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 SMAD5-AS1Q9Y6J3 95 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 PRAG1Q86YV5 1406 aa3.17□□□□□ -1.9
PHC3-216ENST00000497171 TAF1P21675 1872 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 SAA2-SAA4A0A096LPE2 208 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 OR5K3A6NET4 321 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 H7C0S8 307 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 MEIS2O14770 477 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 SSX4O60224 188 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 KRT5P13647 590 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 PFKFB1P16118 471 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 ITGA2P17301 1181 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 AZU1P20160 251 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 CCR3P51677 355 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 CRIP2P52943 208 aaPredicted RBP3.16□□□□□ -1.9
PHC3-216ENST00000497171 RALGDSQ12967 914 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 GTF2H2Q13888 395 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 MELKQ14680 651 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 CBWD6Q4V339 395 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 FAM133BQ5BKY9 247 aaKnown RBP3.16□□□□□ -1.9
PHC3-216ENST00000497171 CBWD3Q5JTY5 395 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 OR7E24Q6IFN5 339 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 GTF2H2CQ6P1K8 395 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 FIGLAQ6QHK4 219 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 KMT5CQ86Y97 462 aa3.16□□□□□ -1.9
PHC3-216ENST00000497171 C1orf87Q8N0U7 546 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms