RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 COG4Q9H9E3 785 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SIAEQ9HAT2 523 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM8AQ9HCN3 771 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CD209Q9NNX6 404 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TXLNGQ9NUQ3 528 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GIMAP4Q9NUV9 329 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SMPD3Q9NY59 655 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RAB21Q9UL25 225 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RUVBL2Q9Y230 463 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RBMX2Q9Y388 322 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PRELID3BQ9Y3B1 194 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RAD54BQ9Y620 910 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CPSF1Q10570 1443 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TRAV34A0A0B4J273 112 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PRR23D1E9PI22 279 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 H7C1Q1 480 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SH2B2O14492 632 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ARHGAP6O43182 974 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 HTRA2O43464 458 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 UGDHO60701 494 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ESRRBO95718 433 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KNG1P01042 644 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CSF2P04141 144 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CD63P08962 238 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PRR23D2P0DMB1 279 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KCNA3P22001 575 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ABCD3P28288 659 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 HOXA7P31268 230 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 HOXA9P31269 272 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PTGER3P43115 390 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC1A6P48664 564 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CCR5P51681 352 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RAD23BP54727 409 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 EPHA5P54756 1037 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 EIF3BP55884 814 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ACTR3P61158 418 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PMP22Q01453 160 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DSC1Q08554 894 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TRA2AQ13595 282 aaKnown RBP eCLIP3.06□□□□□ -1.925e-6■□□□□ 11.3
SNRNP48-202ENST00000496946 SEC23BQ15437 767 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PTGISQ16647 500 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 C2CD6Q53TS8 623 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF484Q5JVG2 852 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 UBXN11Q5T124 520 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RIPPLY2Q5TAB7 128 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 GARNL3Q5VVW2 1013 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RAET1GQ6H3X3 334 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 VITQ6UXI7 678 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC24A5Q71RS6 500 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 GSTA5Q7RTV2 222 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 OTOAQ7RTW8 1153 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 NET1Q7Z628 596 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LHFPL3Q86UP9 236 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SFR1Q86XK3 245 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CNGA4Q8IV77 575 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 HERC6Q8IVU3 1022 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SCN4BQ8IWT1 228 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RCOR2Q8IZ40 523 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CYP4Z2PQ8N1L4 340 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PCDH20Q8N6Y1 951 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 FNDC5Q8NAU1 212 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 OR13C3Q8NGS6 347 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 HASPINQ8TF76 798 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ROBO4Q8WZ75 1007 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC5A5Q92911 643 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 YIPF5Q969M3 257 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 COA7Q96BR5 231 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 OTUB2Q96DC9 234 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF514Q96K75 400 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 C9orf72Q96LT7 481 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PPP1R2P1Q96PQ5 205 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 NEU1Q99519 415 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZYG11BQ9C0D3 744 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MTIF3Q9H2K0 278 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PIGUQ9H490 435 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CATSPERBQ9H7T0 1116 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 COQ10BQ9H8M1 238 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LRRC40Q9H9A6 602 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 UNKLQ9H9P5 680 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MAGEE1Q9HCI5 957 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CHMP1AQ9HD42 196 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KLHL1Q9NR64 748 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SETD4Q9NVD3 440 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TBC1D13Q9NVG8 400 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ELOVL2Q9NXB9 296 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MPP6Q9NZW5 540 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF229Q9UJW7 825 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ANAPC2Q9UJX6 822 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 AGO1Q9UL18 857 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 OGDHLQ9ULD0 1010 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC9A8Q9Y2E8 581 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ARL2BPQ9Y2Y0 163 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC22A7Q9Y694 548 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 V9GYQ6 96 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KIF27Q86VH2 1401 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 COL15A1P39059 1388 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 UTYO14607 1347 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PASKQ96RG2 1323 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 FGD5Q6ZNL6 1462 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms