RNA–Protein interactions for RNA: ENST00000496944.1

NIPSNAP1-206, Transcript of nipsnap homolog 1, humanhuman

TSL 2

Gene NIPSNAP1, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-206ENST00000496944 PNLIPP16233 465 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 RPL10P27635 214 aaKnown RBP20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 CCR7P32248 378 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 CD151P48509 253 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 SIM1P81133 766 aaPredicted RBP20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 BOP1Q14137 746 aaKnown RBP20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 SEPT7Q16181 437 aaKnown RBP20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 KYNUQ16719 465 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 CNSTQ6PJW8 725 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 XKR5Q6UX68 686 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 EFL1Q7Z2Z2 1120 aaKnown RBP20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 SLC9B2Q86UD5 537 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 KRT222Q8N1A0 295 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 PATE1Q8WXA2 126 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 TMEM159Q96B96 161 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 WWP1Q9H0M0 922 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 CDC42EP4Q9H3Q1 356 aaKnown RBP20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 ANKZF1Q9H8Y5 726 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 SARS2Q9NP81 518 aaKnown RBP20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 KLHL42Q9P2K6 505 aa20.96■□□□□ 0.95
NIPSNAP1-206ENST00000496944 SPAARA0A1B0GVQ0 90 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 SLC5A10A0PJK1 596 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CPED1A4D0V7 1026 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 E5RI56 91 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 AHSGP02765 367 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 XRCC1P18887 633 aaPredicted RBP20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 AOAHP28039 575 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 GABRB3P28472 473 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 MAZP56270 477 aaKnown RBP20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 DNAJC3Q13217 504 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 NAB1Q13506 487 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 GUSBP11Q6P575 273 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 OTOAQ7RTW8 1153 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 ZNF438Q7Z4V0 828 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 SFTPA2Q8IWL1 248 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 IFI44Q8TCB0 444 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 LKAAEAR1Q8TD35 194 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 KCNJ9Q92806 393 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 SH3KBP1Q96B97 665 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 AARSD1Q9BTE6 412 aaKnown RBP20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 LATS2Q9NRM7 1088 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CPNE7Q9UBL6 633 aa20.95■□□□□ 0.94
NIPSNAP1-206ENST00000496944 RHPN2P1A8MT19 583 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 IQCF5A8MTL0 148 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 GIPC1O14908 333 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 ZW10O43264 779 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 NIPSNAP2O75323 286 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 RFPL3O75679 317 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 MYF5P13349 255 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 ITGB6P18564 788 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CHRM3P20309 590 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 UBE2IP63279 158 aaKnown RBP20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 PLEKHS1Q5SXH7 462 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CAPRIN2Q6IMN6 1127 aaKnown RBP20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 ZNF549Q6P9A3 640 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 TRMT10CQ7L0Y3 403 aaKnown RBP20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 STRA8Q7Z7C7 330 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 PDZD3Q86UT5 571 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 TRIM48Q8IWZ4 208 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 RBM12BQ8IXT5 1001 aaKnown RBP20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 LILRA3Q8N6C8 439 aaPredicted RBP20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 FBF1Q8TES7 1133 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CXorf40BQ96DE9 158 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 RMDN2Q96LZ7 410 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 FUT8Q9BYC5 575 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 OR52A5Q9H2C5 316 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 POT1Q9NUX5 634 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 SCHIP1Q9P0W5 487 aaPredicted RBP20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 ZNF624Q9P2J8 865 aaPredicted RBP20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 TXNDC16Q9P2K2 825 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 SLC17A6Q9P2U8 582 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 LRIT1Q9P2V4 623 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 PSMD13Q9UNM6 376 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 WDR37Q9Y2I8 494 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 HEBP2Q9Y5Z4 205 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 RNF215Q9Y6U7 377 aa20.94■□□□□ 0.94
NIPSNAP1-206ENST00000496944 ASXL3Q9C0F0 2248 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 IFRD1O00458 451 aaPredicted RBP20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 GPC4O75487 556 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 DKK1O94907 266 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 VIPP01282 170 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 C1QAP02745 245 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 FTH1P19P0C7X4 201 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 MTHFD1P11586 935 aaKnown RBP20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 MCM3P25205 808 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 SLC19A1P41440 591 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 GPR3P46089 330 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 PREPP48147 710 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 E2F1Q01094 437 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 HHEXQ03014 270 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 NR1D2Q14995 579 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CLCA4Q14CN2 919 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 RPE65Q16518 533 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 TTLL9Q3SXZ7 439 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CCDC74AQ96AQ1 378 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 CPNE1Q99829 537 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 UCK1Q9HA47 277 aa20.93■□□□□ 0.94
NIPSNAP1-206ENST00000496944 SMYD2Q9NRG4 433 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms