RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 LRRC39Q96DD0 335 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 FOPNLQ96NB1 174 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 FCRL4Q96PJ5 515 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 CARD6Q9BX69 1037 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 KCNF1Q9H3M0 494 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 KIR3DX1Q9H7L2 352 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 COG4Q9H9E3 785 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 ARFGAP3Q9NP61 516 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 FBXO8Q9NRD0 319 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 INTS10Q9NVR2 710 aaKnown RBP7.44□□□□□ -1.22
CDHR3-214ENST00000496633 SLC23A2Q9UGH3 650 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 RABGEF1Q9UJ41 708 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 GNPTGQ9UJJ9 305 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 SOX13Q9UN79 622 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 PLEKHM1Q9Y4G2 1056 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 ST14Q9Y5Y6 855 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 COMMD10Q9Y6G5 202 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 FRYQ5TBA9 3013 aa7.44□□□□□ -1.22
CDHR3-214ENST00000496633 MN1Q10571 1320 aaPredicted RBP7.44□□□□□ -1.22
CDHR3-214ENST00000496633 DMXL2Q8TDJ6 3036 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 CCDC162PA2VCL2 907 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 STMND1H3BQB6 276 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 KIF2AO00139 706 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 CD3EAPO15446 510 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 FKBP9O95302 570 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 GOT2P00505 430 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 C9P02748 559 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ESR1P03372 595 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 MT-ND3P03897 115 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ZSCAN5DPP0CG00 497 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 LIPCP11150 499 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 OGNP20774 298 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 RPS3P23396 243 aaKnown RBP eCLIP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 FOXN2P32314 431 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 SHMT2P34897 504 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 KCNJ1P48048 391 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ARL4DP49703 201 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ATP1A2P50993 1020 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 PDX1P52945 283 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 CTSCP53634 463 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 TMPRSS3P57727 454 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 THOC5Q13769 683 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 TUBB2AQ13885 445 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 NFE2L1Q14494 772 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 KCNJ11Q14654 390 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 MORF4L2Q15014 288 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 SEPT7Q16181 437 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 PLA2G4EQ3MJ16 856 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 TTLL9Q3SXZ7 439 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 KHDC1Q4VXA5 237 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ZNF648Q5T619 568 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 KIAA0930Q6ICG6 404 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 CAPRIN2Q6IMN6 1127 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 LRRC8EQ6NSJ5 796 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 DET1Q7L5Y6 550 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 PRSS42Q7Z5A4 293 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ARHGAP22Q7Z5H3 698 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 JAMLQ86YT9 394 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 PDIK1LQ8N165 341 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 OTUD6BQ8N6M0 293 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ZSCAN1Q8NBB4 408 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 LSM14AQ8ND56 463 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 OR13J1Q8NGT2 312 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 GPR150Q8NGU9 434 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 OR8K5Q8NH50 307 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 PATE1Q8WXA2 126 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 SLC22A18Q96BI1 424 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 C9orf72Q96LT7 481 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 CCDC74BQ96LY2 380 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 C12orf66Q96MD2 445 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 TUBB2BQ9BVA1 445 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 RAB11FIP5Q9BXF6 653 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 AP1M1Q9BXS5 423 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 FOXP3Q9BZS1 431 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 CCDC68Q9H2F9 335 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 FANCEQ9HB96 536 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 RDH14Q9HBH5 336 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ASCL3Q9NQ33 180 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 IMP3Q9NV31 184 aaKnown RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ZNF624Q9P2J8 865 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 KLHL42Q9P2K6 505 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ASIC3Q9UHC3 531 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 ATXN7L1Q9ULK2 861 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-214ENST00000496633 KCTD3Q9Y597 815 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 USP24Q9UPU5 2620 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 CACNA1BQ00975 2339 aa7.43□□□□□ -1.22
CDHR3-214ENST00000496633 URB1O60287 2271 aaKnown RBP7.42□□□□□ -1.22
CDHR3-214ENST00000496633 TRBV23OR9-2A0A075B6M9 112 aa7.42□□□□□ -1.22
CDHR3-214ENST00000496633 CCDC78A2IDD5 438 aa7.42□□□□□ -1.22
CDHR3-214ENST00000496633 OR52A4PA6NMU1 304 aa7.42□□□□□ -1.22
CDHR3-214ENST00000496633 POLR1CO15160 346 aaPredicted RBP7.42□□□□□ -1.22
CDHR3-214ENST00000496633 RASSF9O75901 435 aa7.42□□□□□ -1.22
CDHR3-214ENST00000496633 USP1O94782 785 aa7.42□□□□□ -1.22
CDHR3-214ENST00000496633 ETS1P14921 441 aa7.42□□□□□ -1.22
CDHR3-214ENST00000496633 BRAFP15056 766 aa7.42□□□□□ -1.22
CDHR3-214ENST00000496633 PBLDP30039 288 aaPredicted RBP7.42□□□□□ -1.22
CDHR3-214ENST00000496633 ATP5DP30049 168 aa7.42□□□□□ -1.22
CDHR3-214ENST00000496633 CASQ1P31415 396 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms